RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 SPATA33Q96N06 139 aa29.16■■■□□ 2.26
PVT1-201ENST00000504719 FAM217BQ9NTX9 383 aaPredicted RBP29.16■■■□□ 2.26
PVT1-201ENST00000504719 DOCK5Q9H7D0 1870 aa29.16■■■□□ 2.26
PVT1-201ENST00000504719 GOLGA8AA7E2F4 631 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 GOLGA8BA8MQT2 603 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 SORBS3O60504 671 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 CHMP4BP1P59074 171 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 HSDL1Q3SXM5 330 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 RASIP1Q5U651 963 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 PCNX4Q63HM2 1172 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 XRRA1Q6P2D8 792 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 Q6ZUG5 572 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 RTEL1Q9NZ71 1219 aa29.15■■■□□ 2.26
PVT1-201ENST00000504719 TRIP12Q14669 1992 aaPredicted RBP29.15■■■□□ 2.26
PVT1-201ENST00000504719 SPATA31C2B4DYI2 1134 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 PPFIA4O75335 1185 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 PSEN2P49810 448 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 FGD1P98174 961 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 SEMA3FQ13275 785 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 HEATR3Q7Z4Q2 680 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 SCLYQ96I15 445 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 KATNAL1Q9BW62 490 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 MLXIPQ9HAP2 919 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 SCN5AQ14524 2016 aa29.14■■■□□ 2.26
PVT1-201ENST00000504719 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.13■■■□□ 2.25
PVT1-201ENST00000504719 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.13■■■□□ 2.25
PVT1-201ENST00000504719 HAS3O00219 553 aa29.13■■■□□ 2.25
PVT1-201ENST00000504719 F2P00734 622 aa29.13■■■□□ 2.25
PVT1-201ENST00000504719 RPS6KB1P23443 525 aa29.13■■■□□ 2.25
PVT1-201ENST00000504719 CDC27P30260 824 aa29.13■■■□□ 2.25
PVT1-201ENST00000504719 ZNF697Q5TEC3 545 aa29.13■■■□□ 2.25
PVT1-201ENST00000504719 WWC2Q6AWC2 1192 aa29.13■■■□□ 2.25
PVT1-201ENST00000504719 FIBPO43427 364 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 EIF5BO60841 1220 aaKnown RBP29.12■■■□□ 2.25
PVT1-201ENST00000504719 FGBP02675 491 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 ZNF286BP0CG31 522 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 APOBRQ0VD83 1088 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 PTGISQ16647 500 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 UBE2SQ16763 222 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 GDF6Q6KF10 455 aaPredicted RBP29.12■■■□□ 2.25
PVT1-201ENST00000504719 RPUSD2Q8IZ73 545 aaKnown RBP29.12■■■□□ 2.25
PVT1-201ENST00000504719 FBXL16Q8N461 479 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 HERVK_113Q902F9 699 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 BCAS3Q9H6U6 928 aa29.12■■■□□ 2.25
PVT1-201ENST00000504719 V9GY48 417 aaPredicted RBP29.12■■■□□ 2.25
PVT1-201ENST00000504719 TANC1Q9C0D5 1861 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 SEC24BO95487 1268 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 NEDD9Q14511 834 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 MFSD10Q14728 455 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 BRF1Q92994 677 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 VWCEQ96DN2 955 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 ALG1Q9BT22 464 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 HDAC6Q9UBN7 1215 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 NAP1L2Q9ULW6 460 aaPredicted RBP29.11■■■□□ 2.25
PVT1-201ENST00000504719 NOD1Q9Y239 953 aa29.11■■■□□ 2.25
PVT1-201ENST00000504719 KIAA0753Q2KHM9 967 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 TYW1BQ6NUM6 668 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 FAM161BQ96MY7 647 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 CTAGE1Q96RT6 745 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 AGXT2Q9BYV1 514 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 ZSWIM6Q9HCJ5 1215 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 GTF2IRD1Q9UHL9 959 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 GTF3C3Q9Y5Q9 886 aa29.1■■■□□ 2.25
PVT1-201ENST00000504719 PITPNM1O00562 1244 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 ADD1P35611 737 aaKnown RBP29.09■■■□□ 2.25
PVT1-201ENST00000504719 METAP2P50579 478 aaKnown RBP eCLIP29.09■■■□□ 2.25
PVT1-201ENST00000504719 PPP1R18Q6NYC8 613 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 RUFY3Q7L099 469 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 NLRX1Q86UT6 975 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 C7orf31Q8N865 590 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 GUCD1Q96NT3 240 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 C16orf70Q9BSU1 422 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 SEMA6BQ9H3T3 888 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 PCDHA6Q9UN73 950 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 STXBP5LQ9Y2K9 1186 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 PCDHA8Q9Y5H6 950 aa29.09■■■□□ 2.25
PVT1-201ENST00000504719 SPDYE3A6NKU9 549 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 hCG_1984214I3L0E3 225 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 NAPAP54920 295 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 BFSP2Q13515 415 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 C8orf34Q49A92 452 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 METTL7BQ6UX53 244 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 CYFIP1Q7L576 1253 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 ZNF713Q8N859 430 aaPredicted RBP29.08■■■□□ 2.25
PVT1-201ENST00000504719 RETREG2Q8NC44 543 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 SENP7Q9BQF6 1050 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 TM6SF1Q9BZW5 370 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 RIC8AQ9NPQ8 531 aa29.08■■■□□ 2.25
PVT1-201ENST00000504719 CCDC196A0A1B0GTZ2 297 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 STXBP3O00186 592 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 IQCF3P0C7M6 154 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 NID2Q14112 1375 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 OTOP2Q7RTS6 562 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 TEX2Q8IWB9 1127 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 GPRASP2Q96D09 838 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 MTIF3Q9H2K0 278 aaKnown RBP29.07■■■□□ 2.24
PVT1-201ENST00000504719 TTYH1Q9H313 450 aaPredicted RBP29.07■■■□□ 2.24
PVT1-201ENST00000504719 BARHL2Q9NY43 387 aa29.07■■■□□ 2.24
PVT1-201ENST00000504719 CXXC1Q9P0U4 656 aaPredicted RBP29.07■■■□□ 2.24
PVT1-201ENST00000504719 CYP46A1Q9Y6A2 500 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms