RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 DNM3Q9UQ16 869 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 PPP2R3BQ9Y5P8 575 aa10.92□□□□□ -0.66
COL1A1-210ENST00000504289 A0A1W2PQJ5 194 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 USP27XA6NNY8 438 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
COL1A1-210ENST00000504289 ZNF76P36508 570 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 HSD17B4P51659 736 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 UBXN1Q04323 297 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 PPP2R5CQ13362 524 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
COL1A1-210ENST00000504289 KIF4BQ2VIQ3 1234 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 NBPF9Q3BBW0 867 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 USH1GQ495M9 461 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 PRR16Q569H4 304 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 HSP90AA4PQ58FG1 418 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 FAM26FQ5R3K3 315 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 FKBP15Q5T1M5 1219 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 ANKRD40Q6AI12 368 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 CYP26C1Q6V0L0 522 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 APOBEC3FQ8IUX4 373 aaKnown RBP10.91□□□□□ -0.66
COL1A1-210ENST00000504289 REXO1L1PQ8IX06 675 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 MYOCDQ8IZQ8 938 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 SYT2Q8N9I0 419 aaPredicted RBP10.91□□□□□ -0.66
COL1A1-210ENST00000504289 KIAA0895Q8NCT3 520 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 NEK9Q8TD19 979 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 SLC5A5Q92911 643 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 RIT2Q99578 217 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 TUBGCP2Q9BSJ2 902 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 L2HGDHQ9H9P8 463 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 KCND2Q9NZV8 630 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 ZNF112Q9UJU3 913 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 CAPN11Q9UMQ6 739 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 KIAA1024Q9UPX6 916 aa10.91□□□□□ -0.66
COL1A1-210ENST00000504289 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 MEIS1O00470 390 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 MSH4O15457 936 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 GYPCP04921 128 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 GAP43P17677 238 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 PMS1P54277 932 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 SLC12A3P55017 1021 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 ADKP55263 362 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 CDK17Q00537 523 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 FKBP3Q00688 224 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 PPP2R3AQ06190 1150 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 EDRF1Q3B7T1 1238 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 CEP55Q53EZ4 464 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 LDHDQ86WU2 507 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 SPICE1Q8N0Z3 855 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 ZNF397Q8NF99 534 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 OR8K1Q8NGG5 319 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 CNOT6LQ96LI5 555 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 DNAJC7Q99615 494 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 FEZ1Q99689 392 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 NUDT12Q9BQG2 462 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 SLF1Q9BQI6 1058 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 VPS16Q9H269 839 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 AS3MTQ9HBK9 375 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 PANK4Q9NVE7 773 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 TRMT1Q9NXH9 659 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 TAB2Q9NYJ8 693 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 MYO1AQ9UBC5 1043 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 VAV3Q9UKW4 847 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 MAPK8IP1Q9UQF2 711 aa10.9□□□□□ -0.66
COL1A1-210ENST00000504289 LUC7L2Q9Y383 392 aaKnown RBP10.9□□□□□ -0.66
COL1A1-210ENST00000504289 TRIM49BA6NDI0 452 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 PSMD10O75832 226 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 EYA4O95677 639 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 FCER1AP12319 257 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 IDEP14735 1019 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 CYP11B2P19099 503 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 CASP14P31944 242 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 MTIF2P46199 727 aaKnown RBP10.89□□□□□ -0.67
COL1A1-210ENST00000504289 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
COL1A1-210ENST00000504289 TUBB4BP68371 445 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 ZBED6P86452 979 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 TBC1D8BQ0IIM8 1120 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 COASYQ13057 564 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 MAN2A1Q16706 1144 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 KIAA1755Q5JYT7 1200 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 ZNF662Q6ZS27 426 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 CATSPER3Q86XQ3 398 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
COL1A1-210ENST00000504289 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
COL1A1-210ENST00000504289 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 SEMA6BQ9H3T3 888 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 SLC39A2Q9NP94 309 aa10.89□□□□□ -0.67
COL1A1-210ENST00000504289 ABHD10Q9NUJ1 306 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms