RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 KRT27Q7Z3Y8 459 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PODNQ7Z5L7 613 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 MORC4Q8TE76 937 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 BPIFA3Q9BQP9 254 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SYT15Q9BQS2 421 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 METTL14Q9HCE5 456 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 TYW1Q9NV66 732 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SEL1LQ9UBV2 794 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ZC3H7BQ9UGR2 993 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 UBN2Q6ZU65 1347 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 TSPY2A6NKD2 308 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 DNM1LO00429 736 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 NEMFO60524 1076 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ADRA2BP18089 450 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CD97P48960 835 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SMTNP53814 917 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PPP2R3AQ06190 1150 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 WASHC5Q12768 1159 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CBX3Q13185 183 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 WDR78Q5VTH9 848 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 COPS6Q7L5N1 327 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 MILR1Q7Z6M3 343 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 HOOK3Q86VS8 718 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC25Q86WR0 208 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ZNF444Q8N0Y2 327 aaPredicted RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ANKRD44Q8N8A2 993 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 WASF1Q92558 559 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ZNF75CPQ92670 426 aaPredicted RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 MRRFQ96E11 262 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CABS1Q96KC9 395 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SPAG5Q96R06 1193 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ERP44Q9BS26 406 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CLSTN2Q9H4D0 955 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 DBF4Q9UBU7 674 aaPredicted RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 L1RE1Q9UN81 338 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CEP131Q9UPN4 1083 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PARP3Q9Y6F1 533 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 C4AP0C0L4 1744 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 C4BP0C0L5 1744 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 TTC41PQ6P2S7 1318 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 IVLP07476 585 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CES1P23141 567 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 HPDP32754 393 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ACADSBP45954 432 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 TIMM10P62072 90 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 SULT2A1Q06520 285 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 MAP3K12Q12852 859 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ADAM9Q13443 819 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 RFTN1Q14699 578 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 PTPROQ16827 1216 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ZNF746Q6NUN9 644 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 PI16Q6UXB8 463 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC24Q8N4L8 307 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 EDC3Q96F86 508 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 GBA3Q9H227 469 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 PHAXQ9H814 394 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 PSTPIP2Q9H939 334 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 KLC4Q9NSK0 619 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ASAP1Q9ULH1 1129 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CDHR2Q9BYE9 1310 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 TMEM238LA0A1B0GVL6 79 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 hCG_1642624A0A1W2PR95 340 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC160A6NGH7 325 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 LSM1O15116 133 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 RNMTO43148 476 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ASAP2O43150 1006 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 PPP1R12BO60237 982 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 EGFRP00533 1210 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 GNRH1P01148 92 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CTNNA2P26232 953 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 PFKPQ01813 784 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 MKRN3Q13064 507 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 MSLNQ13421 630 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC6Q16204 474 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 AKAP4Q5JQC9 854 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 SLC30A9Q6PML9 568 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 YTHDF3Q7Z739 585 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 VPS37AQ8NEZ2 397 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 IL17REQ8NFR9 667 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 FAM136AQ96C01 138 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 TMEM87BQ96K49 555 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 SCYL1Q96KG9 808 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 AIFM3Q96NN9 605 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 VPS16Q9H269 839 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 DHX36Q9H2U1 1008 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ZBTB40Q9NUA8 1239 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 SEC63Q9UGP8 760 aaKnown RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 TPCN1Q9ULQ1 816 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 SSX2IPQ9Y2D8 614 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 LAMB4A4D0S4 1761 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 ELP1O95163 1332 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC171Q6TFL3 1326 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 MYH11P35749 1972 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 LINC00854A0A1B0GVQ3 168 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 LRRIQ3A6PVS8 624 aaPredicted RBP4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 EBAG9O00559 213 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 BCRP11274 1271 aa4.03□□□□□ -1.76
PCDH11X-208ENST00000504220 EIF2B5Q13144 721 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms