RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 FAM81BQ96LP2 452 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 HAUS8Q9BT25 410 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 HOMER3Q9NSC5 361 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 MAGED2Q9UNF1 606 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 ACTN1P12814 892 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 TCP1P17987 556 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CDC25BP30305 580 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 MECOMQ03112 1051 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 MYO1EQ12965 1108 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 MMEL1Q495T6 779 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CIAPIN1Q6FI81 312 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 CHMP6Q96FZ7 201 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 UBN1Q9NPG3 1134 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 SRP68Q9UHB9 627 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 HECW2Q9P2P5 1572 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 HEG1Q9ULI3 1381 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 IRX4P78413 519 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 TFAMQ00059 246 aaKnown RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 RBL2Q08999 1139 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 GPR101Q96P66 508 aaPredicted RBP7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 GCNAQ96QF7 691 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 HAUS4Q9H6D7 363 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 PI4KBQ9UBF8 816 aa7.8□□□□□ -1.16
SYNPO2-205ENST00000504178 ERVV-1B6SEH8 477 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MMP1P03956 469 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 CASP14P31944 242 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 OSTNP61366 133 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 SNX1Q13596 522 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 KIAA1841Q6NSI8 718 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM160B2Q86V87 743 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 NLRP10Q86W26 655 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 UNC5CLQ8IV45 518 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 KCTD6Q8NC69 237 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MAP4K1Q92918 833 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ANTXR1Q9H6X2 564 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 UBN2Q6ZU65 1347 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 GOLGA8SH3BPF8 625 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 CPP00450 1065 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 INHBAP08476 426 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MARK3P27448 753 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 APOA5Q6Q788 366 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 KSR1Q8IVT5 923 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 LRRC8CQ8TDW0 803 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 LRGUKQ96M69 825 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 UBE2TQ9NPD8 197 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 IGSF1Q8N6C5 1336 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 POC1B-GALNT4F8VUJ3 575 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MYO1FO00160 1098 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 EHHADHQ08426 723 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MUM1Q2TAK8 710 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ADCK5Q3MIX3 580 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 CCNYQ8ND76 341 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 CPSF3Q9UKF6 684 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MAN1B1Q9UKM7 699 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 PPP1R2P3Q6NXS1 205 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF449Q6P9G9 518 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ARHGEF25Q86VW2 580 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 DCLK2Q8N568 766 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 GBP7Q8N8V2 638 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 PUS7LQ9H0K6 701 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 RPF1Q9H9Y2 349 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 IRAK4Q9NWZ3 460 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 STAP2Q9UGK3 403 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 SERPINB13Q9UIV8 391 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 EPN1Q9Y6I3 576 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MCF2LO15068 1137 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 KRT10P13645 584 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 DYNLT1P63172 113 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 DARS2Q6PI48 645 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 USP17L2Q6R6M4 530 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 SCARA5Q6ZMJ2 495 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ARHGEF18Q6ZSZ5 1173 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 SMYD4Q8IYR2 804 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 SIX6OS1Q8N1H7 587 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM114A2Q9NRY5 505 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 GCNT4Q9P109 453 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 A0A1B0GUA9 196 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 A0A1W2PQ27 194 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 A0A1W2PQ64 194 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 A0A1W2PQD8 194 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ARHGEF37A1IGU5 675 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 PRPF3O43395 683 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 DDIT3P35638 169 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ARL4AP40617 200 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 THOC5Q13769 683 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 SLC39A14Q15043 492 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 OR6B2Q6IFH4 312 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 GPT2Q8TD30 523 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 FAM149B1Q96BN6 582 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 CFAP36Q96G28 342 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 DDX27Q96GQ7 796 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 MASTLQ96GX5 879 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 ATG3Q9NT62 314 aa7.79□□□□□ -1.16
SYNPO2-205ENST00000504178 PNMA6FA0A0J9YX94 578 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 LRRN2O75325 713 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 CDK8P49336 464 aa7.78□□□□□ -1.16
SYNPO2-205ENST00000504178 GOLGA8FQ08AF8 430 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms