RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.63□□□□□ -1.35
UBE3D-205ENST00000503942 PPP4R1LQ9P1A2 415 aa6.63□□□□□ -1.35
UBE3D-205ENST00000503942 PDPK1O15530 556 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 B4GALT3O60512 393 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 RBM10P98175 930 aaKnown RBP6.62□□□□□ -1.35
UBE3D-205ENST00000503942 RASGRF1Q13972 1273 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 NCAPHQ15003 741 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 TCEAL1Q15170 157 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 SURF1Q15526 300 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 MIB1Q86YT6 1006 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 LCORQ96JN0 433 aaPredicted RBP6.62□□□□□ -1.35
UBE3D-205ENST00000503942 SIT1Q9Y3P8 196 aa6.62□□□□□ -1.35
UBE3D-205ENST00000503942 SHROOM4Q9ULL8 1493 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 NTRK1P04629 796 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 SEPHS1P49903 392 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 ITGA1P56199 1179 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 CPNE8Q86YQ8 564 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 DCP2Q8IU60 420 aaKnown RBP6.61□□□□□ -1.35
UBE3D-205ENST00000503942 FAM26EQ8N5C1 309 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 USP33Q8TEY7 942 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 MRFAP1L1Q96HT8 127 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 WHRNQ9P202 907 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 BACE2Q9Y5Z0 518 aa6.61□□□□□ -1.35
UBE3D-205ENST00000503942 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBE3D-205ENST00000503942 PLEKHH3Q7Z736 793 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 JAZF1Q86VZ6 243 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 DNERQ8NFT8 737 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 DNAJC7Q99615 494 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 HAUS7Q99871 368 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 TBX22Q9Y458 520 aa6.6□□□□□ -1.35
UBE3D-205ENST00000503942 TRBV23OR9-2A0A075B6M9 112 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 C2orf71A6NGG8 1288 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 SUSD5O60279 629 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 EPHX1P07099 455 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 SPATC1Q76KD6 591 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 ZC3H18Q86VM9 953 aaKnown RBP6.59□□□□□ -1.35
UBE3D-205ENST00000503942 LILRB2Q8N423 598 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 ZNF513Q8N8E2 541 aaPredicted RBP6.59□□□□□ -1.35
UBE3D-205ENST00000503942 ADCY4Q8NFM4 1077 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 KLHL25Q9H0H3 589 aa6.59□□□□□ -1.35
UBE3D-205ENST00000503942 NPHP3-ACAD11A0A0J9YXS1 232 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 TLDC2A0PJX2 215 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 C7orf72A4D263 438 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 GPR42O15529 346 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 NPHS1O60500 1241 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 PAMP19021 973 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 SLC10A6Q3KNW5 377 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 EEPD1Q7L9B9 569 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
UBE3D-205ENST00000503942 AP5M1Q9H0R1 490 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 KANSL2Q9H9L4 492 aa6.58□□□□□ -1.36
UBE3D-205ENST00000503942 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
UBE3D-205ENST00000503942 AMHP03971 560 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 FUCA1P04066 466 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 ZNF28P17035 718 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 KLF10Q13118 480 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 DPY19L1Q2PZI1 675 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 MTERF2Q49AM1 385 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 HEATR6Q6AI08 1181 aaKnown RBP6.57□□□□□ -1.36
UBE3D-205ENST00000503942 STK32CQ86UX6 486 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 CIR1Q86X95 450 aaPredicted RBP6.57□□□□□ -1.36
UBE3D-205ENST00000503942 PLEKHO2Q8TD55 490 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 MBD6Q96DN6 1003 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 RNPC3Q96LT9 517 aaKnown RBP6.57□□□□□ -1.36
UBE3D-205ENST00000503942 FGD4Q96M96 766 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 APEX2Q9UBZ4 518 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 PFDN2Q9UHV9 154 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 MRPL42Q9Y6G3 142 aaKnown RBP6.57□□□□□ -1.36
UBE3D-205ENST00000503942 CADPSQ9ULU8 1353 aa6.57□□□□□ -1.36
UBE3D-205ENST00000503942 ANKRD34BA5PLL1 514 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 NPEPPSL1A6NEC2 478 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 VAMP4O75379 141 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 SELENOPP49908 381 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 ZNF143P52747 638 aaPredicted RBP6.56□□□□□ -1.36
UBE3D-205ENST00000503942 EPHB4P54760 987 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 AMPD2Q01433 879 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 GRB10Q13322 594 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 R3HDM1Q15032 1099 aaKnown RBP6.56□□□□□ -1.36
UBE3D-205ENST00000503942 PALM2Q8IXS6 379 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 ZNF669Q96BR6 464 aaPredicted RBP6.56□□□□□ -1.36
UBE3D-205ENST00000503942 GBP3Q9H0R5 595 aa6.56□□□□□ -1.36
UBE3D-205ENST00000503942 CGGBP1Q9UFW8 167 aaPredicted RBP6.56□□□□□ -1.36
UBE3D-205ENST00000503942 SGSM2O43147 1006 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 IFRD2Q12894 506 aaPredicted RBP6.55□□□□□ -1.36
UBE3D-205ENST00000503942 ZNF585AQ6P3V2 769 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 PKN3Q6P5Z2 889 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 JMYQ8N9B5 988 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 IGDCC4Q8TDY8 1250 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 WWC2-AS2Q96NR7 200 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 APBA2Q99767 749 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 LGR4Q9BXB1 951 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 EPN3Q9H201 632 aa6.55□□□□□ -1.36
UBE3D-205ENST00000503942 SSRP1Q08945 709 aaKnown RBP6.54□□□□□ -1.36
UBE3D-205ENST00000503942 ADAM9Q13443 819 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 SV2CQ496J9 727 aa6.54□□□□□ -1.36
UBE3D-205ENST00000503942 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms