RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 TUBB4BP68371 445 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 COASYQ13057 564 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 SHROOM1Q2M3G4 852 aaPredicted RBP16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 NFRKBQ6P4R8 1299 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 FAM53CQ9NYF3 392 aa16.61■□□□□ 0.25
SH3TC1-206ENST00000502669 COL16A1Q07092 1604 aaPredicted RBP16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 EIF3CLB5ME19 914 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 TRIM58Q8NG06 486 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 EIF3CQ99613 913 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 TSGA10Q9BZW7 698 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 RIOX1Q9H6W3 641 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 CAPN6Q9Y6Q1 641 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 MIIPQ5JXC2 388 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 SND1Q7KZF4 910 aaKnown RBP eCLIP16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 L1RE1Q9UN81 338 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 PSMD14O00487 310 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 IL1R1P14778 569 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 POTEGQ6S5H5 508 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 POTEEQ6S8J3 1075 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 ARHGAP20Q9P2F6 1191 aa16.6■□□□□ 0.25
SH3TC1-206ENST00000502669 ZBTB5O15062 677 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 PLA2G4BP0C869 781 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 MCM3P25205 808 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 USP14P54578 494 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 SLC9C1Q4G0N8 1177 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 LUC7LQ9NQ29 371 aaKnown RBP16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 COL4A3BPQ9Y5P4 624 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 HOXA13P31271 388 aaPredicted RBP16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 ADAM9Q13443 819 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 SFMBT2Q5VUG0 894 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 CENPPQ6IPU0 288 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 ZFPM1Q8IX07 1006 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 IFT81Q8WYA0 676 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 CWC15Q9P013 229 aaKnown RBP16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 PCDHAC2Q9Y5I4 1007 aa16.59■□□□□ 0.25
SH3TC1-206ENST00000502669 PVALEFA0A1B0GWK0 134 aa16.58■□□□□ 0.25
SH3TC1-206ENST00000502669 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.25
SH3TC1-206ENST00000502669 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.25
SH3TC1-206ENST00000502669 GJD4Q96KN9 370 aaPredicted RBP16.58■□□□□ 0.25
SH3TC1-206ENST00000502669 FAM204AQ9H8W3 233 aa16.58■□□□□ 0.25
SH3TC1-206ENST00000502669 FTCDO95954 541 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 EEF2P13639 858 aaKnown RBP16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 ECM1Q16610 540 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 CDC42EP5Q6NZY7 148 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 COG1Q8WTW3 980 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 UBXN2AP68543 259 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 AMPD2Q01433 879 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 LRRC63Q05C16 580 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 DDR1Q08345 913 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 SEPT2Q15019 361 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 CERS5Q8N5B7 392 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 FAM133AQ8N9E0 248 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 TBC1D5Q92609 795 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 MTMR9Q96QG7 549 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 ERGIC2Q96RQ1 377 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 COA1Q9GZY4 146 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 RIC8AQ9NPQ8 531 aa16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 SEPT11Q9NVA2 429 aaKnown RBP16.58■□□□□ 0.24
SH3TC1-206ENST00000502669 PDE2AO00408 941 aaPredicted RBP16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 KLHL30Q0D2K2 578 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 NOX5Q96PH1 765 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 CENPHQ9H3R5 247 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 RSPH14Q9UHP6 348 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 ROBO3Q96MS0 1386 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 CETN3O15182 167 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 TUBBP07437 444 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 ICA1Q05084 483 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 SLC30A10Q6XR72 485 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 NT5C3AQ9H0P0 336 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 EMILIN3Q9NT22 766 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 PACSIN2Q9UNF0 486 aaPredicted RBP16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 TMCO5BA8MYB1 307 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 PPP1R11O60927 126 aaPredicted RBP16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 RNF40O75150 1001 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 NR2F2P24468 414 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 NT5C2P49902 561 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 PLS1Q14651 629 aa16.57■□□□□ 0.24
SH3TC1-206ENST00000502669 PLAGL2Q9UPG8 496 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms