RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ENC1O14682 589 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 ATP1A1P05023 1023 aaKnown RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 SSBP05455 408 aaKnown RBP eCLIP18.38■□□□□ 0.53
VCAN-204ENST00000502527 MMP10P09238 476 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 RHOXF2BP0C7M4 288 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 SLURP2P0DP57 97 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 FKBP3Q00688 224 aaKnown RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 AP3B2Q13367 1082 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 BEND6Q5SZJ8 279 aaPredicted RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 MOXD1Q6UVY6 613 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 CCDC65Q8IXS2 484 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 SLFN12Q8IYM2 578 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 MBOAT7Q96N66 472 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 PURBQ96QR8 312 aaKnown RBP18.38■□□□□ 0.53
VCAN-204ENST00000502527 RHOXF2Q9BQY4 288 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 EDEM3Q9BZQ6 932 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 NRXN2Q9P2S2 1712 aa18.38■□□□□ 0.53
VCAN-204ENST00000502527 RCCD1A6NED2 376 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 DDTLA6NHG4 134 aaPredicted RBP18.37■□□□□ 0.53
VCAN-204ENST00000502527 MAP2K7O14733 419 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 USO1O60763 962 aaKnown RBP18.37■□□□□ 0.53
VCAN-204ENST00000502527 RBM5P52756 815 aaKnown RBP eCLIP18.37■□□□□ 0.53
VCAN-204ENST00000502527 CACNB3P54284 484 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 HDXQ7Z353 690 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 C2CD5Q86YS7 1000 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 ZNF622Q969S3 477 aaKnown RBP eCLIP18.37■□□□□ 0.53
VCAN-204ENST00000502527 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 KCNQ5Q9NR82 932 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 HDAC6Q9UBN7 1215 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 FAM198AQ9UFP1 575 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 KIAA1024Q9UPX6 916 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 PLA2G4BP0C869 781 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 CYP27A1Q02318 531 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 TATDN1Q6P1N9 297 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 TMEM179Q6ZVK1 233 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 NOA1Q8NC60 698 aaKnown RBP18.37■□□□□ 0.53
VCAN-204ENST00000502527 GLIS3Q8NEA6 775 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 SECISBP2LQ93073 1101 aaKnown RBP18.37■□□□□ 0.53
VCAN-204ENST00000502527 RPGRIP1Q96KN7 1286 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 CEP63Q96MT8 703 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 COL4A3BPQ9Y5P4 624 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 ADAMTSL1Q8N6G6 1762 aa18.37■□□□□ 0.53
VCAN-204ENST00000502527 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
VCAN-204ENST00000502527 EPHB6O15197 1021 aa18.36■□□□□ 0.53
VCAN-204ENST00000502527 ICA1Q05084 483 aa18.36■□□□□ 0.53
VCAN-204ENST00000502527 CKAP4Q07065 602 aaKnown RBP18.36■□□□□ 0.53
VCAN-204ENST00000502527 DACT2Q5SW24 774 aa18.36■□□□□ 0.53
VCAN-204ENST00000502527 ARHGAP20Q9P2F6 1191 aa18.36■□□□□ 0.53
VCAN-204ENST00000502527 MYH4Q9Y623 1939 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 E9PMD0 336 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 TRAF5O00463 557 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 GNA14O95837 355 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 OAS2P29728 719 aaKnown RBP18.35■□□□□ 0.53
VCAN-204ENST00000502527 CCDC40Q4G0X9 1142 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 RRAGAQ7L523 313 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 AMNQ9BXJ7 453 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 IFIH1Q9BYX4 1025 aaKnown RBP18.35■□□□□ 0.53
VCAN-204ENST00000502527 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 DEF6Q9H4E7 631 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 PCDHA13Q9Y5I0 950 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 MEIS2O14770 477 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 POLR3GO15318 223 aaPredicted RBP18.35■□□□□ 0.53
VCAN-204ENST00000502527 LCA5LO95447 670 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
VCAN-204ENST00000502527 KIF11P52732 1056 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 VSNL1P62760 191 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 GPS2Q13227 327 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 HAUS3Q68CZ6 603 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 WDR93Q6P2C0 686 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 SH3BP5LQ7L8J4 393 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 GPBP1Q86WP2 473 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 MSL3Q8N5Y2 521 aaKnown RBP18.35■□□□□ 0.53
VCAN-204ENST00000502527 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 ABCB6Q9NP58 842 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 PCDHAC2Q9Y5I4 1007 aa18.35■□□□□ 0.53
VCAN-204ENST00000502527 POTEB3A0JP26 581 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 MACROD2A1Z1Q3 448 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 LRRC53A6NM62 1247 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 POTECB2RU33 542 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 ZNF263O14978 683 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 ECE2O60344 883 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 EIF4A3P38919 411 aaKnown RBP18.34■□□□□ 0.53
VCAN-204ENST00000502527 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 POTEBQ6S5H4 581 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 TRIM58Q8NG06 486 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 SERPINA10Q9UK55 444 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 L1RE1Q9UN81 338 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 PCDHA2Q9Y5H9 948 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 DUSP10Q9Y6W6 482 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 F5H6K3 240 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 TBX3O15119 743 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms