RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 KIF28PB7ZC32 967 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 CST5P28325 142 aaPredicted RBP5.18□□□□□ -1.58
MATR3-202ENST00000502422 ICA1Q05084 483 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 MTX1Q13505 466 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 CCDC144BQ3MJ40 725 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 TNNI3KQ59H18 835 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 CCSAPQ6IQ19 270 aaPredicted RBP5.18□□□□□ -1.58
MATR3-202ENST00000502422 CHD1LQ86WJ1 897 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 ARNTL2Q8WYA1 636 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 ZNF516Q92618 1163 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 SPSB2Q99619 263 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 MTRQ99707 1265 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 LNPKQ9C0E8 428 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 PIH1D3Q9NQM4 214 aaKnown RBP5.18□□□□□ -1.58
MATR3-202ENST00000502422 TMX2Q9Y320 296 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 FPGT-TNNI3KV9GXZ4 949 aa5.18□□□□□ -1.58
MATR3-202ENST00000502422 PRRC2BQ5JSZ5 2229 aaKnown RBP5.18□□□□□ -1.58
MATR3-202ENST00000502422 COL11A1P12107 1806 aaPredicted RBP5.18□□□□□ -1.58
MATR3-202ENST00000502422 WDFY4Q6ZS81 3184 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MAGEB6P1A0A0J9YX57 407 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 PATL2C9JE40 543 aaKnown RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 VWA5AO00534 786 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ZEB2O60315 1214 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 REC8O95072 547 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 SNAI1O95863 264 aaPredicted RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 F12P00748 615 aaPredicted RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 GNAI2P04899 355 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 CA3P07451 260 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ACTN1P12814 892 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ALADP13716 330 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 POU3F3P20264 500 aaPredicted RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 GJA9P57773 515 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MSS51Q4VC12 460 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 AMOTL1Q8IY63 956 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ANKRD35Q8N283 1001 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ZNF397Q8NF99 534 aaPredicted RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 USP26Q9BXU7 913 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 CRNKL1Q9BZJ0 848 aaKnown RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 GPR108Q9NPR9 543 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ZBTB40Q9NUA8 1239 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 SWAP70Q9UH65 585 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 A0A0G2JMZ2 1700 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MUC6Q6W4X9 2439 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 GADD45BO75293 160 aaPredicted RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 CABYRO75952 493 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 BRD1O95696 1058 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 CD4P01730 458 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 TRIM27P14373 513 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 GYS2P54840 703 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 BEX3Q00994 111 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 GABPAQ06546 454 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 VAC14Q08AM6 782 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ITGA7Q13683 1181 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MUM1L1Q5H9M0 696 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 KIAA1755Q5JYT7 1200 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ZKSCAN2Q63HK3 967 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 SNRNP48Q6IEG0 339 aaKnown RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 CXCL17Q6UXB2 119 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MAMDC4Q6UXC1 1216 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 DEFB128Q7Z7B8 93 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 CPXCR1Q8N123 301 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 COL26A1Q96A83 441 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 SCLYQ96I15 445 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ZNF512BQ96KM6 892 aaPredicted RBP5.17□□□□□ -1.58
MATR3-202ENST00000502422 SPATA32Q96LK8 384 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 TEX13BQ9BXU2 312 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 SEZ6LQ9BYH1 1024 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 C11orf16Q9NQ32 467 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 FBXO28Q9NVF7 368 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MAP10Q9P2G4 905 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 PPP1R9AQ9ULJ8 1098 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 ADAMTS5Q9UNA0 930 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 MYH8P13535 1937 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 UMODL1Q5DID0 1318 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 RAD50Q92878 1312 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 LRRC37A2A6NM11 1700 aa5.17□□□□□ -1.58
MATR3-202ENST00000502422 TRANK1O15050 2925 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 PNMA6EA0A0J9YXQ4 647 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 SURF6O75683 361 aaKnown RBP5.16□□□□□ -1.58
MATR3-202ENST00000502422 DXOO77932 396 aaKnown RBP5.16□□□□□ -1.58
MATR3-202ENST00000502422 PFKMP08237 780 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 SUPT20HL2P0C7V6 817 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 NHLH1Q02575 133 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 TNFAIP2Q03169 654 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 CT47A1Q5JQC4 288 aaPredicted RBP5.16□□□□□ -1.58
MATR3-202ENST00000502422 AXDND1Q5T1B0 1012 aaPredicted RBP5.16□□□□□ -1.58
MATR3-202ENST00000502422 KRT40Q6A162 431 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 FBXO38Q6PIJ6 1188 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 EP400NLQ6ZTU2 488 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 GJD3Q8N144 294 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 SDR42E1Q8WUS8 393 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 CCDC17Q96LX7 622 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 NCAPGQ9BPX3 1015 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 FUCA2Q9BTY2 467 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 AP5M1Q9H0R1 490 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 CCDC8Q9H0W5 538 aaPredicted RBP5.16□□□□□ -1.58
MATR3-202ENST00000502422 TMX1Q9H3N1 280 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 LCMT1Q9UIC8 334 aa5.16□□□□□ -1.58
MATR3-202ENST00000502422 ZNF214Q9UL59 606 aaPredicted RBP5.16□□□□□ -1.58
MATR3-202ENST00000502422 B4GALT4O60513 344 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms