RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 REXO2Q9Y3B8 237 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 DUSP10Q9Y6W6 482 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 COL14A1Q05707 1796 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 SMIM24O75264 130 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF189O75820 626 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PDHA1P08559 390 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 MARCKSP29966 332 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 HPDP32754 393 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 FXR1P51114 621 aaKnown RBP eCLIP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 CDR1P51861 262 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 RPS8P62241 208 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 NNTQ13423 1086 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 LRRC41Q15345 812 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 DHX32Q7L7V1 743 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 SAPCD2Q86UD0 394 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PNMA8AQ86V59 439 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC17A8Q8NDX2 589 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TMC2Q8TDI7 906 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 CUL5Q93034 780 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 RSRC1Q96IZ7 334 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PSMB7Q99436 277 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 EPN3Q9H201 632 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYO6Q9UM54 1294 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTAGE9A4FU28 777 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PHF20L1A8MW92 1017 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 AHCYL1O43865 530 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 RANBP6O60518 1105 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 MATR3P43243 847 aaKnown RBP eCLIP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 NLRP12P59046 1061 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 ADAM9Q13443 819 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TTF1Q15361 905 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TBC1D1Q86TI0 1168 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 CNBD1Q8NA66 436 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 OR2W6PQ8NHA6 318 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 AENQ8WTP8 325 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 LBHD1Q9BQE6 289 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PAGR1Q9BTK6 254 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 LRRC1Q9BTT6 524 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 GPR108Q9NPR9 543 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 CORO1CQ9ULV4 474 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 ERICH2A1L162 156 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 IFIT3O14879 490 aaKnown RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PLSCR1O15162 318 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 STX10O60499 249 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 ABCC6O95255 1503 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 NTSR2O95665 410 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TUBB4AP04350 444 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZFYP08048 801 aaPredicted RBP6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 BLMHQ13867 455 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 PPP1R7Q15435 360 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TNS2Q63HR2 1409 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 SYNE3Q6ZMZ3 975 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 MROH5Q6ZUA9 1318 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 AMIGO3Q86WK7 504 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TSC22D3Q99576 134 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLF1Q9BQI6 1058 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 RHBDL2Q9NX52 303 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRIM33Q9UPN9 1127 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 GJA3Q9Y6H8 435 aa6.37□□□□□ -1.39
SOX2-OT-218ENST00000498731 RCCD1A6NED2 376 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 RPS6KA4O75676 772 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 LDHAP00338 332 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 LDHCP07864 332 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 GNAQP50148 359 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 BPIFB4P59827 614 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 SKOR1P84550 965 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANO7Q6IWH7 933 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 MTHFD1LQ6UB35 978 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRIM58Q8NG06 486 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NCOA7Q8NI08 942 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPIRE2Q8WWL2 714 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CHP1Q99653 195 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NACAP1Q9BZK3 213 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRIM4Q9C037 500 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 AATFQ9NY61 560 aaKnown RBP eCLIP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CNOT8Q9UFF9 292 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 GUCA1BQ9UMX6 200 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC45A1Q9Y2W3 748 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CYP2D7A0A087X1C5 515 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC3A2P08195 630 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCDC175P0C221 793 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF24P17028 368 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NDUFV2P19404 249 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 KLRK1P26718 216 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 DYNLL1P63167 89 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZC2HC1CQ53FD0 456 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 NAA16Q6N069 864 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM47EQ6ZV65 393 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 ARMC9Q7Z3E5 817 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 TMEM110Q86TL2 294 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 DZIP1Q86YF9 867 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 CMTR1Q8N1G2 835 aaKnown RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 KIF2BQ8N4N8 673 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 SMCR8Q8TEV9 937 aaPredicted RBP6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 HOOK2Q96ED9 719 aa6.36□□□□□ -1.39
SOX2-OT-218ENST00000498731 GBP3Q9H0R5 595 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms