RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724	PMS1	P54277	932 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	USP46	P62068	366 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CYP27A1	Q02318	531 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	PAK2	Q13177	524 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	PDCL	Q13371	301 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	NPY5R	Q15761	445 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	HLF	Q16534	295 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	IL17A	Q16552	155 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	PFKFB3	Q16875	520 aa	Predicted RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	GLE1	Q53GS7	698 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC178	Q5BJE1	867 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	DALRD3	Q5D0E6	543 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	FIGN	Q5HY92	759 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CFAP58	Q5T655	872 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	C9orf131	Q5VYM1	1079 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	HAUS3	Q68CZ6	603 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	TTC19	Q6DKK2	380 aa	Predicted RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	TTI2	Q6NXR4	508 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	KDM7A	Q6ZMT4	941 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	DTHD1	Q6ZMT9	781 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	IRF2BP1	Q8IU81	584 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CREG2	Q8IUH2	290 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CDAN1	Q8IWY9	1227 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	PARP9	Q8IXQ6	854 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	IFT20	Q8IY31	132 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	BLID	Q8IZY5	108 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CNPY4	Q8N129	248 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	GPATCH11	Q8N954	259 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	RDH13	Q8NBN7	331 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	TSEN2	Q8NCE0	465 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	SPATA4	Q8NEY3	305 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	KAT2B	Q92831	832 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	RRP36	Q96EU6	259 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	ZFR	Q96KR1	1074 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC43	Q96MW1	224 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	OSBPL9	Q96SU4	736 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	MTR	Q99707	1265 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	LRRC1	Q9BTT6	524 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	NOC4L	Q9BVI4	516 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	IFIH1	Q9BYX4	1025 aa	Known RBP	4.93	□□□□□ -1.62
TNC-208	ENST00000498724	TTYH3	Q9C0H2	523 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	EHD4	Q9H223	541 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CUEDC2	Q9H467	287 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	RABEP2	Q9H5N1	569 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	MLXIP	Q9HAP2	919 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	RRAGC	Q9HB90	399 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	NMRK2	Q9NPI5	230 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	DUOX1	Q9NRD9	1551 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	DISC1	Q9NRI5	854 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	STIM2	Q9P246	746 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	TOGARAM1	Q9Y4F4	1720 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	SAMM50	Q9Y512	469 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	PCDHA13	Q9Y5I0	950 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	CAPN7	Q9Y6W3	813 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	MYH2	Q9UKX2	1941 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	MYH13	Q9UKX3	1938 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	BCOR	Q6W2J9	1755 aa		4.93	□□□□□ -1.62
TNC-208	ENST00000498724	MYH3	P11055	1940 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ANKRD36C	Q5JPF3	1778 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	BHMG1	C9JSJ3	638 aa	Predicted RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	LAD1	O00515	517 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	NCK2	O43639	380 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	KLRC4	O43908	158 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ORC4	O43929	436 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ZPR1	O75312	459 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	RHOBTB3	O94955	611 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	FSBP	O95073	299 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	FGFR1OP	O95684	399 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	CHRNA5	P30532	468 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	RDX	P35241	583 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	MAP2K2	P36507	400 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	EIF4A3	P38919	411 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	IGHMBP2	P38935	993 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	MAGEA1	P43355	309 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	KLK7	P49862	253 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	BCAM	P50895	628 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ATP1A2	P50993	1020 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	APLP1	P51693	650 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	KIF11	P52732	1056 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	NAP1L1	P55209	391 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ASIC1	P78348	528 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	HTRA3	P83110	453 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	SLC7A5	Q01650	507 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	TTMP	Q5BVD1	217 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	RNF187	Q5TA31	235 aa	Predicted RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	FBXW10	Q5XX13	1052 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	NFRKB	Q6P4R8	1299 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	CABP7	Q86V35	215 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	C2CD5	Q86YS7	1000 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	SRBD1	Q8N5C6	995 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ARFGAP2	Q8N6H7	521 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	DNAJC5G	Q8N7S2	189 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	HDAC7	Q8WUI4	952 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	SDR42E1	Q8WUS8	393 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ARL8A	Q96BM9	186 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	CABS1	Q96KC9	395 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	NOX5	Q96PH1	765 aa		4.92	□□□□□ -1.62

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