RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 GHRHRQ02643 423 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 NCAPHQ15003 741 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 HS1BP3Q53T59 392 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 MUM1L1Q5H9M0 696 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 SNRNP48Q6IEG0 339 aaKnown RBP9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 KLHL10Q6JEL2 608 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 SLC30A10Q6XR72 485 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 DRC7Q8IY82 874 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 SPC24Q8NBT2 197 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 ERMNQ8TAM6 284 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 RBM46Q8TBY0 533 aaKnown RBP9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 LRRC15Q8TF66 581 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 ZC3H15Q8WU90 426 aaKnown RBP9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 GJA10Q969M2 543 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 WNK4Q96J92 1243 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 PNMA5Q96PV4 448 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 UIMC1Q96RL1 719 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 MTRQ99707 1265 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 NT5C3AQ9H0P0 336 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 TAF1DQ9H5J8 278 aaPredicted RBP9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 EXOC1Q9NV70 894 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 KBTBD4Q9NVX7 518 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 PCDHA12Q9UN75 941 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 AFG3L2Q9Y4W6 797 aa9.06□□□□□ -0.96
PDZRN3-212ENST00000498048 IGLV3-22A0A075B6J6 115 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 SPDYE16A6NNV3 312 aaPredicted RBP9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 POTECB2RU33 542 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 MSH4O15457 936 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 MSNP26038 577 aaKnown RBP9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 STAT3P40763 770 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 OAZ1P54368 228 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 AMPD3Q01432 767 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 PAK1Q13153 545 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 STIM1Q13586 685 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 PDIA5Q14554 519 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 DHX8Q14562 1220 aaKnown RBP9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 KCNB1Q14721 858 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 SH3D19Q5HYK7 790 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 ZNF658Q5TYW1 1059 aaPredicted RBP9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 DLK2Q6UY11 383 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 GADL1Q6ZQY3 521 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 SMYD4Q8IYR2 804 aaPredicted RBP9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 ANKRD13AQ8IZ07 590 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 SAMD3Q8N6K7 520 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 REPS2Q8NFH8 660 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 CLEC4DQ8WXI8 215 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 TBC1D5Q92609 795 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 RAD54LQ92698 747 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 OTUD5Q96G74 571 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 MRFAP1L1Q96HT8 127 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 FAM20AQ96MK3 541 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 TRERF1Q96PN7 1200 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 TRIM9Q9C026 710 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 BLOC1S4Q9NUP1 217 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 COL20A1Q9P218 1284 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 GDAQ9Y2T3 454 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 KAT6AQ92794 2004 aa9.05□□□□□ -0.96
PDZRN3-212ENST00000498048 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 ERCC5P28715 1186 aaPredicted RBP9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 SPIRE1Q08AE8 756 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 MCM6Q14566 821 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 CT47A1Q5JQC4 288 aaPredicted RBP9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 HYIQ5T013 277 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 RNF207Q6ZRF8 634 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 SV2BQ7L1I2 683 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 ZSCAN30Q86W11 494 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 PROCA1Q8NCQ7 364 aaPredicted RBP9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 IL31RAQ8NI17 732 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 TEX13BQ9BXU2 312 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 LRRC27Q9C0I9 530 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 ACAD9Q9H845 621 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 MAP3K20Q9NYL2 800 aaKnown RBP9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 ZNF214Q9UL59 606 aaPredicted RBP9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 NFE2L3Q9Y4A8 694 aa9.04□□□□□ -0.96
PDZRN3-212ENST00000498048 A0A0G2JLL6 359 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ESPNB1AK53 854 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 CHMP2AO43633 222 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 KLRC4O43908 158 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 GAS7O60861 476 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 RHOBTB3O94955 611 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 SERPINC1P01008 464 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 SSBP05455 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 TPM3P06753 285 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ATP1A3P13637 1013 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 EIF2AK2P19525 551 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms