RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 INPP4AQ96PE3 977 aaPredicted RBP17.6■□□□□ 0.41
NUP50-219ENST00000497960 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 FIBPO43427 364 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 SORBS3O60504 671 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 PPFIA4O75335 1185 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 CYP2C9P11712 490 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 CDC27P30260 824 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 ICAM3P32942 547 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 SP2Q02086 613 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 FUT2Q10981 343 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 NEDD9Q14511 834 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 PPP1R18Q6NYC8 613 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 NLRX1Q86UT6 975 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
NUP50-219ENST00000497960 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 EHMT1Q9H9B1 1298 aa17.59■□□□□ 0.41
NUP50-219ENST00000497960 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
NUP50-219ENST00000497960 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 CCL23P55773 120 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 UBE2SQ16763 222 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 PSRC1Q6PGN9 363 aaPredicted RBP17.58■□□□□ 0.4
NUP50-219ENST00000497960 TEX2Q8IWB9 1127 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 PPP1R13LQ8WUF5 828 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 KAT2BQ92831 832 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.47e-6■□□□□ 9.4
NUP50-219ENST00000497960 IL23AQ9NPF7 189 aa17.58■□□□□ 0.4
NUP50-219ENST00000497960 NOP56O00567 594 aaKnown RBP17.57■□□□□ 0.4
NUP50-219ENST00000497960 ZNF286BP0CG31 522 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 ACRP10323 421 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
NUP50-219ENST00000497960 ADD1P35611 737 aaKnown RBP17.57■□□□□ 0.4
NUP50-219ENST00000497960 PSEN2P49810 448 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 ADCY7P51828 1080 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
NUP50-219ENST00000497960 MFSD10Q14728 455 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 PTGISQ16647 500 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 TMEM240Q5SV17 173 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 METTL7BQ6UX53 244 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 SESTD1Q86VW0 696 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
NUP50-219ENST00000497960 C7orf31Q8N865 590 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 GLT8D2Q9H1C3 349 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 RIC8AQ9NPQ8 531 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 PCDHA6Q9UN73 950 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 PCDHA8Q9Y5H6 950 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 MYH7BA7E2Y1 1941 aa17.57■□□□□ 0.4
NUP50-219ENST00000497960 STXBP3O00186 592 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 F2P00734 622 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
NUP50-219ENST00000497960 BFSP2Q13515 415 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 FAM109BQ6ICB4 259 aaPredicted RBP17.56■□□□□ 0.4
NUP50-219ENST00000497960 ZNF365Q70YC5 407 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 C16orf59Q7L2K0 433 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
NUP50-219ENST00000497960 GPRASP2Q96D09 838 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 SENP7Q9BQF6 1050 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
NUP50-219ENST00000497960 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 WNT8AQ9H1J5 351 aa17.56■□□□□ 0.4
NUP50-219ENST00000497960 MTIF3Q9H2K0 278 aaKnown RBP17.56■□□□□ 0.4
NUP50-219ENST00000497960 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.55■□□□□ 0.4
NUP50-219ENST00000497960 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.55■□□□□ 0.4
NUP50-219ENST00000497960 SMCO2A6NFE2 343 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 FOSP01100 380 aaPredicted RBP17.55■□□□□ 0.4
NUP50-219ENST00000497960 FGBP02675 491 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 PFKFB3Q16875 520 aaPredicted RBP17.55■□□□□ 0.4
NUP50-219ENST00000497960 ZNF697Q5TEC3 545 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 TYW1BQ6NUM6 668 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 Q7L0L9 218 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 CYFIP1Q7L576 1253 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 CCDC155Q8N6L0 562 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 SCLYQ96I15 445 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
NUP50-219ENST00000497960 HAS3O00219 553 aa17.54■□□□□ 0.4
NUP50-219ENST00000497960 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
NUP50-219ENST00000497960 SCG2P13521 617 aa17.54■□□□□ 0.4
NUP50-219ENST00000497960 RBM25P49756 843 aaKnown RBP17.54■□□□□ 0.4
NUP50-219ENST00000497960 EVCP57679 992 aa17.54■□□□□ 0.4
NUP50-219ENST00000497960 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
NUP50-219ENST00000497960 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
NUP50-219ENST00000497960 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
NUP50-219ENST00000497960 NID2Q14112 1375 aa17.53■□□□□ 0.4
NUP50-219ENST00000497960 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms