RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
ERCC8-208ENST00000497892 MYADML2A6NDP7 307 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 CTAGE5O15320 804 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
ERCC8-208ENST00000497892 NR3C2P08235 984 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 GJA9P57773 515 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 STK3Q13188 491 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 PKN1Q16512 942 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 DUSP28Q4G0W2 176 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 SMARCC2Q8TAQ2 1214 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 WDR11Q9BZH6 1224 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
ERCC8-208ENST00000497892 PHF24Q9UPV7 400 aa12.92□□□□□ -0.34
ERCC8-208ENST00000497892 ESYT2A0FGR8 921 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 CPLX1O14810 134 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 PFKFB2O60825 505 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
ERCC8-208ENST00000497892 ADCY7P51828 1080 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
ERCC8-208ENST00000497892 SCRN1Q12765 414 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 TMEM63BQ5T3F8 832 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 CCSAPQ6IQ19 270 aaPredicted RBP12.91□□□□□ -0.34
ERCC8-208ENST00000497892 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
ERCC8-208ENST00000497892 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
ERCC8-208ENST00000497892 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
ERCC8-208ENST00000497892 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 RIC8AQ9NPQ8 531 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 Q9Y3F1 56 aa12.91□□□□□ -0.34
ERCC8-208ENST00000497892 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
ERCC8-208ENST00000497892 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 CDKL5O76039 1030 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 RGS20O76081 388 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 ARIH2O95376 493 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
ERCC8-208ENST00000497892 PTGS1P23219 599 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 CCND2P30279 289 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 ACLYP53396 1101 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 TTLL4Q14679 1199 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 UBE2SQ16763 222 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 NOL8Q76FK4 1167 aaKnown RBP12.9□□□□□ -0.34
ERCC8-208ENST00000497892 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
ERCC8-208ENST00000497892 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 SENP6Q9GZR1 1112 aaPredicted RBP12.9□□□□□ -0.34
ERCC8-208ENST00000497892 AP5M1Q9H0R1 490 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 GLT8D2Q9H1C3 349 aa12.9□□□□□ -0.34
ERCC8-208ENST00000497892 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 MOXD2PA6NHM9 499 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 STAM2O75886 525 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 DEXIO95424 95 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 LARGE1O95461 756 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 SSRP1Q08945 709 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 SNX17Q15036 470 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 FSCN1Q16658 493 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 ME3Q16798 604 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 PCNX4Q63HM2 1172 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 XRRA1Q6P2D8 792 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
ERCC8-208ENST00000497892 ZMYND12Q9H0C1 365 aa12.89□□□□□ -0.35
ERCC8-208ENST00000497892 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
ERCC8-208ENST00000497892 BEX3Q00994 111 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 AP3B2Q13367 1082 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 KCNA10Q16322 511 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 FERMT2Q96AC1 680 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 TBC1D32Q96NH3 1257 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
ERCC8-208ENST00000497892 SH3GLB2Q9NR46 395 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
ERCC8-208ENST00000497892 PCDHA6Q9UN73 950 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 PCDHA8Q9Y5H6 950 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
ERCC8-208ENST00000497892 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
ERCC8-208ENST00000497892 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 FOSP01100 380 aaPredicted RBP12.87□□□□□ -0.35
ERCC8-208ENST00000497892 GH1P01241 217 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 ASGR1P07306 291 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 CPT1AP50416 773 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms