RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	RBM10	P98175	930 aa	Known RBP	12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	TKFC	Q3LXA3	575 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	ANKRD54	Q6NXT1	300 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	SYCE2	Q6PIF2	218 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	ZDHHC14	Q8IZN3	488 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	LRRC47	Q8N1G4	583 aa	Known RBP	12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	KAT2B	Q92831	832 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	KIFC2	Q96AC6	838 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	ZNF689	Q96CS4	500 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	DYNLL2	Q96FJ2	89 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	CYP39A1	Q9NYL5	469 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	HDAC6	Q9UBN7	1215 aa		12.83	□□□□□ -0.36
RNF25-206	ENST00000497832	MYH7B	A7E2Y1	1941 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832		F5H6K3	240 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	UBTFL1	P0CB47	393 aa	Predicted RBP	12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	SRGAP2B	P0DMP2	458 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	KLRC3	Q07444	240 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	PPP2R5B	Q15173	497 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	DUSP6	Q16828	381 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	POF1B	Q8WVV4	589 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	NECTIN4	Q96NY8	510 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	ERVK-5	Q9HDB9	667 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	FEM1B	Q9UK73	627 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	MYH4	Q9Y623	1939 aa		12.82	□□□□□ -0.36
RNF25-206	ENST00000497832	LAMA5	O15230	3695 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	SPTLC1	O15269	473 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	NDUFB10	O96000	172 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	CYP2D6	P10635	497 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	HOXB8	P17481	243 aa	Predicted RBP	12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	ZAP70	P43403	619 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	TTC39A	Q5SRH9	613 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	C7orf31	Q8N865	590 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	KDF1	Q8NAX2	398 aa	Predicted RBP	12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	APBB2	Q92870	758 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	COPS5	Q92905	334 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	SECISBP2L	Q93073	1101 aa	Known RBP	12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	CNOT1	A5YKK6	2376 aa	Known RBP	12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	CACNA1I	Q9P0X4	2223 aa		12.81	□□□□□ -0.36
RNF25-206	ENST00000497832	PER2	O15055	1255 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	ALDH5A1	P51649	535 aa	Predicted RBP	12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	TBC1D8B	Q0IIM8	1120 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	BTG3	Q14201	252 aa	Predicted RBP	12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	KLHL23	Q8NBE8	558 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	NETO1	Q8TDF5	533 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	RASGRP4	Q8TDF6	673 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	SCFD2	Q8WU76	684 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	TRERF1	Q96PN7	1200 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	POMK	Q9H5K3	350 aa		12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	ADD3	Q9UEY8	706 aa	Known RBP	12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.8	□□□□□ -0.36
RNF25-206	ENST00000497832	TTC3	P53804	2025 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	TAF4	O00268	1085 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	IDH1	O75874	414 aa	Known RBP	12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	MMP3	P08254	477 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	TEC	P42680	631 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	CDK8	P49336	464 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	CCDC158	Q5M9N0	1113 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	SERINC5	Q86VE9	423 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	C1orf210	Q8IVY1	113 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	WDR63	Q8IWG1	891 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	SIX5	Q8N196	739 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	PLCD3	Q8N3E9	789 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	PURB	Q96QR8	312 aa	Known RBP	12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	LIMD1	Q9UGP4	676 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	HDAC5	Q9UQL6	1122 aa		12.79	□□□□□ -0.36
RNF25-206	ENST00000497832	THPO	P40225	353 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	ZNF528	Q3MIS6	628 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	C16orf86	Q6ZW13	317 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	MRPL50	Q8N5N7	158 aa	Known RBP	12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	DLGAP2	Q9P1A6	1054 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	NYAP2	Q9P242	653 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	DACH1	Q9UI36	760 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	USP18	Q9UMW8	372 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	DUSP12	Q9UNI6	340 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	LHX6	Q9UPM6	363 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	UST	Q9Y2C2	406 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	DENND4A	Q7Z401	1863 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	AKAP13	Q12802	2813 aa		12.78	□□□□□ -0.36
RNF25-206	ENST00000497832	TENM4	Q6N022	2769 aa		12.77	□□□□□ -0.36
RNF25-206	ENST00000497832	MAGEB6P1	A0A0J9YX57	407 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	HAS3	O00219	553 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	DGKI	O75912	1065 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	TXN	P10599	105 aa	Known RBP	12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	CAST	P20810	708 aa	Known RBP	12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	PSEN2	P49810	448 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	RING1	Q06587	406 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	PDE4B	Q07343	736 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	MUM1L1	Q5H9M0	696 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	TDRD5	Q8NAT2	981 aa	Known RBP	12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	AFG1L	Q8WV93	481 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	DDX1	Q92499	740 aa	Known RBP	12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	KATNAL1	Q9BW62	490 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	OSBPL7	Q9BZF2	842 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	PARD6A	Q9NPB6	346 aa		12.77	□□□□□ -0.37
RNF25-206	ENST00000497832	MRPL42	Q9Y6G3	142 aa	Known RBP	12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms