RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 C8orf37Q96NL8 207 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 LNPKQ9C0E8 428 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 AP5M1Q9H0R1 490 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 PCDH18Q9HCL0 1135 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 BTG4Q9NY30 223 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 ZNF652Q9Y2D9 606 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 STK10O94804 968 aaKnown RBP5.06□□□□□ -1.6
PSPC1-205ENST00000497722 GTF2F1P35269 517 aaKnown RBP eCLIP5.06□□□□□ -1.6
PSPC1-205ENST00000497722 SARSP49591 514 aaKnown RBP5.06□□□□□ -1.6
PSPC1-205ENST00000497722 ITGA1P56199 1179 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 PPP2R2AP63151 447 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 ZXDAP98168 799 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 MAP4K2Q12851 820 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 MILR1Q7Z6M3 343 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 PPIL6Q8IXY8 311 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 KYQ8NBH2 561 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 HNRNPLLQ8WVV9 542 aaKnown RBP5.06□□□□□ -1.6
PSPC1-205ENST00000497722 TMEM169Q96HH4 297 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 NTMQ9P121 344 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 LRP2BPQ9P2M1 347 aa5.06□□□□□ -1.6
PSPC1-205ENST00000497722 CNOT11Q9UKZ1 510 aaKnown RBP5.06□□□□□ -1.6
PSPC1-205ENST00000497722 DLX3O60479 287 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 RPL13P26373 211 aaKnown RBP5.05□□□□□ -1.6
PSPC1-205ENST00000497722 ADAM9Q13443 819 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 LSAMPQ13449 338 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 SMAD4Q13485 552 aaKnown RBP5.05□□□□□ -1.6
PSPC1-205ENST00000497722 DDR2Q16832 855 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 ADAMTS17Q8TE56 1095 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 TRMT2BQ96GJ1 504 aaKnown RBP5.05□□□□□ -1.6
PSPC1-205ENST00000497722 RBM15Q96T37 977 aaKnown RBP eCLIP5.05□□□□□ -1.6
PSPC1-205ENST00000497722 USP35Q9P2H5 1018 aa5.05□□□□□ -1.6
PSPC1-205ENST00000497722 TCRBV5S2A0A599 114 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 U2SURPO15042 1029 aaKnown RBP5.04□□□□□ -1.6
PSPC1-205ENST00000497722 MSCO60682 206 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 CD300LDQ6UXZ3 194 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 ANKS3Q6ZW76 656 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.04□□□□□ -1.6
PSPC1-205ENST00000497722 SGSM3Q96HU1 749 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 HSPBP1Q9NZL4 362 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 WASF3Q9UPY6 502 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 PCDHA2Q9Y5H9 948 aa5.04□□□□□ -1.6
PSPC1-205ENST00000497722 HGSO14964 777 aaPredicted RBP5.03□□□□□ -1.6
PSPC1-205ENST00000497722 MYO1BO43795 1136 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 TNFRSF1AP19438 455 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 STAT5AP42229 794 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 KCNJ6P48051 423 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 ZNF827Q17R98 1081 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 TTLL7Q6ZT98 887 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 FERMT3Q86UX7 667 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 TTLL6Q8N841 843 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 ARRDC4Q8NCT1 418 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 SREK1Q8WXA9 508 aaKnown RBP5.03□□□□□ -1.6
PSPC1-205ENST00000497722 IER2Q9BTL4 223 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 TRIM55Q9BYV6 548 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 PDGFDQ9GZP0 370 aaPredicted RBP5.03□□□□□ -1.6
PSPC1-205ENST00000497722 ARHGEF4Q9NR80 690 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 ST7Q9NRC1 585 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 GPR27Q9NS67 375 aa5.03□□□□□ -1.6
PSPC1-205ENST00000497722 LRG1P02750 347 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 NTRK3Q16288 839 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 FAM26FQ5R3K3 315 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 STEAP3Q658P3 488 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 RSPO2Q6UXX9 243 aaPredicted RBP5.02□□□□□ -1.61
PSPC1-205ENST00000497722 STK32CQ86UX6 486 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 ZC3H18Q86VM9 953 aaKnown RBP5.02□□□□□ -1.61
PSPC1-205ENST00000497722 CKAP2LQ8IYA6 745 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 KCTD13Q8WZ19 329 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 OSBP2Q969R2 916 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 DRC1Q96MC2 740 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 EPB41L1Q9H4G0 881 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 NGRNQ9NPE2 291 aaKnown RBP5.02□□□□□ -1.61
PSPC1-205ENST00000497722 USP40Q9NVE5 1235 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 CLDND1Q9NY35 253 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 DTLQ9NZJ0 730 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 MSRB2Q9Y3D2 182 aa5.02□□□□□ -1.61
PSPC1-205ENST00000497722 K7ESM1 405 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 SMARCA5O60264 1052 aaPredicted RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 ITGB3P05106 788 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 FGFR1P11362 822 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 ZNF28P17035 718 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 CNR2P34972 360 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 GJA9P57773 515 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 RAB33AQ14088 237 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 CHRNA2Q15822 529 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 HABP4Q5JVS0 413 aaKnown RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 UBXN11Q5T124 520 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 CYP4F22Q6NT55 531 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 TEPPQ6URK8 271 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 PROSER1Q86XN7 944 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 ST13P5Q8NFI4 369 aaPredicted RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 DDX1Q92499 740 aaKnown RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 SSBP3Q9BWW4 388 aaPredicted RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 SMOC1Q9H4F8 434 aa5.01□□□□□ -1.61
PSPC1-205ENST00000497722 PPARGC1AQ9UBK2 798 aaKnown RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 COA3Q9Y2R0 106 aaPredicted RBP5.01□□□□□ -1.61
PSPC1-205ENST00000497722 AGRPO00253 132 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 NKX3-2P78367 333 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 HSP90AA2PQ14568 343 aaPredicted RBP5□□□□□ -1.61
PSPC1-205ENST00000497722 RGL3Q3MIN7 710 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms