RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 MMP3P08254 477 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 SCG2P13521 617 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 NAPAP54920 295 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 LAMC2Q13753 1193 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 BRDTQ58F21 947 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 CELF3Q5SZQ8 465 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 BADQ92934 168 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 PHKBQ93100 1093 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
CTDSP1-214ENST00000497677 SMCO2A6NFE2 343 aa18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 ST18O60284 1047 aa18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 HOXD8P13378 290 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 DHX37Q8IY37 1157 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 PPTC7Q8NI37 304 aa18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 KAT2BQ92831 832 aa18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 UBE2OQ9C0C9 1292 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-214ENST00000497677 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 GGPS1O95749 300 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 MCM2P49736 904 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 NBPF20Q3BBV1 942 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 HSDL1Q3SXM5 330 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
CTDSP1-214ENST00000497677 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 FIBPO43427 364 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 B4GALT4O60513 344 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 TIMP1P01033 207 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 RAG1P15918 1043 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 ITGB5P18084 799 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 ADCY7P51828 1080 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 DGKDQ16760 1214 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 GNPTABQ3T906 1256 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 TDHQ8IZJ6 230 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 SLC26A6Q9BXS9 759 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 UBIAD1Q9Y5Z9 338 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 LAMA3Q16787 3333 aa18.29■□□□□ 0.52
CTDSP1-214ENST00000497677 TLR3O15455 904 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 SORBS3O60504 671 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 PPFIA4O75335 1185 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 NFRKBQ6P4R8 1299 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 SPATA33Q96N06 139 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 SENP7Q9BQF6 1050 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 GLT8D2Q9H1C3 349 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
CTDSP1-214ENST00000497677 ATP9AO75110 1047 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 EPHB4P54760 987 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 AK2P54819 239 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 STK3Q13188 491 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 ANO3Q9BYT9 981 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 MLXIPQ9HAP2 919 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 JADE2Q9NQC1 790 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 TRMT13Q9NUP7 481 aaKnown RBP18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 TELO2Q9Y4R8 837 aa18.27■□□□□ 0.52
CTDSP1-214ENST00000497677 HAS3O00219 553 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 F2P00734 622 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 AKAP17AQ02040 695 aaKnown RBP18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 SCRN1Q12765 414 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 AP3B2Q13367 1082 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 NEDD9Q14511 834 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 MFSD5Q6N075 450 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 CYFIP1Q7L576 1253 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 CYP2W1Q8TAV3 490 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 C16orf70Q9BSU1 422 aa18.26■□□□□ 0.51
CTDSP1-214ENST00000497677 PFKFB2O60825 505 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 KCNA2P16389 499 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 SREBF1P36956 1147 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 PTPN11Q06124 597 aaPredicted RBP18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 SHHQ15465 462 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 C9orf50Q5SZB4 431 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 SESTD1Q86VW0 696 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 MXRA8Q9BRK3 442 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
CTDSP1-214ENST00000497677 UMODL1Q5DID0 1318 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 MAFGO15525 162 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 ZNF286BP0CG31 522 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 CYP2C9P11712 490 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms