RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RPGRIP1LQ68CZ1 1315 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 SENP3-EIF4A1A0A087X0R7 540 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 LRRC10BA6NIK2 292 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 GOLGA8AA7E2F4 631 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 FAM227AF5H4B4 570 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 M0R3H8 397 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 FANCGO15287 622 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 POU2F2P09086 479 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 TERF1P54274 439 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 ZNF445P59923 1031 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 TNFAIP2Q03169 654 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 C19orf57Q0VDD7 668 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 TERF2Q15554 542 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 ALDH1L2Q3SY69 923 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 DGKKQ5KSL6 1271 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 FAM182BQ5T319 152 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 NBPF12Q5TAG4 269 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-224ENST00000497488 MRPL14Q6P1L8 145 aaKnown RBP7.28□□□□□ -1.24
BRCA1-224ENST00000497488 ELMSAN1Q6PJG2 1045 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 RSPO2Q6UXX9 243 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-224ENST00000497488 RIPOR1Q6ZS17 1223 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 GRAMD1CQ8IYS0 662 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 KREMEN2Q8NCW0 462 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 PCDH19Q8TAB3 1148 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 PPP1R35Q8TAP8 253 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCA1-224ENST00000497488 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 MAP3K14Q99558 947 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 PHF20Q9BVI0 1012 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 OSBPL5Q9H0X9 879 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-224ENST00000497488 BHMT2Q9H2M3 363 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 CCM2LQ9NUG4 571 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-224ENST00000497488 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 GJD2Q9UKL4 321 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 FHOD1Q9Y613 1164 aa7.28□□□□□ -1.24
BRCA1-224ENST00000497488 A6NCN8 305 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 GRK2P25098 689 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 ARL4DP49703 201 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 ADKP55263 362 aaKnown RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 ERVK-24P63145 666 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 PIP4K2BP78356 416 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 PPFIA1Q13136 1202 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 PPP2R5DQ14738 602 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 C1QTNF12Q5T7M4 302 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 INTS11Q5TA45 600 aaKnown RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 DARS2Q6PI48 645 aaKnown RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 OVCH1Q7RTY7 1134 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 KIAA0319LQ8IZA0 1049 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 KRT78Q8N1N4 520 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 MIER2Q8N344 545 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 APOL5Q9BWW9 433 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 USP26Q9BXU7 913 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 VPS11Q9H270 941 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 KIAA1586Q9HCI6 787 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 PDP2Q9P2J9 529 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 GDF2Q9UK05 429 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 DIS3Q9Y2L1 958 aaKnown RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 GPR55Q9Y2T6 319 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-224ENST00000497488 SMARCA2P51531 1590 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 HMGXB3Q12766 1538 aa7.27□□□□□ -1.25
BRCA1-224ENST00000497488 PEG3Q9GZU2 1588 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 H3BML4 177 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NCAM2O15394 837 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 ORC4O43929 436 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 SRGAP2CP0DJJ0 459 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NTF4P34130 210 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 PPM1AP35813 382 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 ZEB1P37275 1124 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NUCB1Q02818 461 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NKG7Q16617 165 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NOL9Q5SY16 702 aaKnown RBP7.26□□□□□ -1.25
BRCA1-224ENST00000497488 FAM180BQ6P0A1 224 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 DPP9Q86TI2 863 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NSUN6Q8TEA1 469 aaKnown RBP7.26□□□□□ -1.25
BRCA1-224ENST00000497488 WNT8BQ93098 351 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 LPIN3Q9BQK8 851 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 NOL6Q9H6R4 1146 aaKnown RBP7.26□□□□□ -1.25
BRCA1-224ENST00000497488 GPRC5BQ9NZH0 403 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 TPCN1Q9ULQ1 816 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 SLC6A14Q9UN76 642 aa7.26□□□□□ -1.25
BRCA1-224ENST00000497488 GOLIM4O00461 696 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 SLFN14P0C7P3 912 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 CDC25BP30305 580 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 PRIM2P49643 509 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 PHC1P78364 1004 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 PAK1Q13153 545 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 FAM133BQ5BKY9 247 aaKnown RBP7.25□□□□□ -1.25
BRCA1-224ENST00000497488 GDF6Q6KF10 455 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-224ENST00000497488 SYDE1Q6ZW31 735 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-224ENST00000497488 DENND1CQ8IV53 801 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 ANKRD18AQ8IVF6 992 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 PPIL6Q8IXY8 311 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 FIBCD1Q8N539 461 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 WDR18Q9BV38 432 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 FRRS1LQ9P0K9 344 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms