RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ACSL6Q9UKU0 697 aa7.06□□□□□ -1.28
GGPS1-208ENST00000497327 IRAK3Q9Y616 596 aa7.06□□□□□ -1.28
GGPS1-208ENST00000497327 TAF6LQ9Y6J9 622 aa7.06□□□□□ -1.28
GGPS1-208ENST00000497327 ZBTB7CA1YPR0 619 aa7.05□□□□□ -1.28
GGPS1-208ENST00000497327 ENDOUP21128 410 aaKnown RBP7.05□□□□□ -1.28
GGPS1-208ENST00000497327 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
GGPS1-208ENST00000497327 TAB3Q8N5C8 712 aaPredicted RBP7.05□□□□□ -1.28
GGPS1-208ENST00000497327 MSH6P52701 1360 aa7.05□□□□□ -1.28
GGPS1-208ENST00000497327 ITSN1Q15811 1721 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 ANKRD26Q9UPS8 1709 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 A0A1W2PQ45 241 aaPredicted RBP7.04□□□□□ -1.28
GGPS1-208ENST00000497327 A0A1W2PQY0 241 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 FAM86C2PA6NEL3 165 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 PRKCAP17252 672 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 LAPTM5Q13571 262 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 WDR43Q15061 677 aaKnown RBP eCLIP7.04□□□□□ -1.28
GGPS1-208ENST00000497327 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 TMEM151BQ8IW70 566 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 TMEM87AQ8NBN3 555 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 MZB1Q8WU39 189 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 CFAP53Q96M91 514 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 JMJD8Q96S16 334 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 SLC12A9Q9BXP2 914 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
GGPS1-208ENST00000497327 RGPD8O14715 1765 aaPredicted RBP7.04□□□□□ -1.28
GGPS1-208ENST00000497327 ABLIM1O14639 778 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 MPOP05164 745 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 GSNP06396 782 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
GGPS1-208ENST00000497327 IL13P35225 146 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 PMS1P54277 932 aaKnown RBP7.03□□□□□ -1.28
GGPS1-208ENST00000497327 KRT28Q7Z3Y7 464 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 NUP43Q8NFH3 380 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 IMPACTQ9P2X3 320 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 KIF20BQ96Q89 1820 aa7.03□□□□□ -1.28
GGPS1-208ENST00000497327 CDK12Q9NYV4 1490 aaPredicted RBP7.03□□□□□ -1.28
GGPS1-208ENST00000497327 ZNF521Q96K83 1311 aa7.02□□□□□ -1.28
GGPS1-208ENST00000497327 LTBP4Q8N2S1 1624 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 XIRP1Q702N8 1843 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 DIAPH1O60610 1272 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 AFF3P51826 1226 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 CYP4F8P98187 520 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 FANCCQ00597 558 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 CBX2Q14781 532 aaPredicted RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 RRS1Q15050 365 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 TDRD10Q5VZ19 366 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 OLFML2BQ68BL8 750 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 BRINP3Q76B58 766 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 TMC6Q7Z403 805 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 LDHDQ86WU2 507 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 CCDC144CPQ8IYA2 1237 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 DHRS1Q96LJ7 313 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 PLEKHF1Q96S99 279 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 SRRTQ9BXP5 876 aaKnown RBP7.02□□□□□ -1.29
GGPS1-208ENST00000497327 SBNO1A3KN83 1393 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 PIK3C2AO00443 1686 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 SHPRHQ149N8 1683 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 USP54Q70EL1 1684 aa7.02□□□□□ -1.29
GGPS1-208ENST00000497327 USP19O94966 1318 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 ADAMTS20P59510 1910 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 PXDNQ92626 1479 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 H0Y8X5 98 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 MSL3P1P0C860 447 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 IMPDH2P12268 514 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 ZNF76P36508 570 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 ARL4AP40617 200 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 MVKQ03426 396 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 RAB3GAP1Q15042 981 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 ZNF394Q53GI3 561 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 ANKRD39Q53RE8 183 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 AXDND1Q5T1B0 1012 aaPredicted RBP7.01□□□□□ -1.29
GGPS1-208ENST00000497327 DCAF15Q66K64 600 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 RPTNQ6XPR3 784 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 FAM129CQ86XR2 697 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 DSCC1Q9BVC3 393 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 XYLT2Q9H1B5 865 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 NUDCQ9Y266 331 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 PCDHA5Q9Y5H7 936 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 NPHP3Q7Z494 1330 aa7.01□□□□□ -1.29
GGPS1-208ENST00000497327 KIF1AQ12756 1690 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 NUDT19A8MXV4 375 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 APAF1O14727 1248 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 GSTM1P09488 218 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 U2AF1L5P0DN76 240 aaPredicted RBP7□□□□□ -1.29
GGPS1-208ENST00000497327 ZNF445P59923 1031 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 U2AF1Q01081 240 aaKnown RBP eCLIP7□□□□□ -1.29
GGPS1-208ENST00000497327 EIF4A2Q14240 407 aaKnown RBP7□□□□□ -1.29
GGPS1-208ENST00000497327 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 USP48Q86UV5 1035 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 NGEFQ8N5V2 710 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 RBBP8NLQ8NC74 664 aaPredicted RBP7□□□□□ -1.29
GGPS1-208ENST00000497327 DDX17Q92841 729 aaKnown RBP7□□□□□ -1.29
GGPS1-208ENST00000497327 SMARCC1Q92922 1105 aaPredicted RBP7□□□□□ -1.29
GGPS1-208ENST00000497327 RELTQ969Z4 430 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 RUNDC1Q96C34 613 aa7□□□□□ -1.29
GGPS1-208ENST00000497327 TM9SF2Q99805 663 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms