RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GTPBP4Q9BZE4 634 aaKnown RBP9.71□□□□□ -0.86
U2AF1-212ENST00000496462 RPTORQ8N122 1335 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 PRKAR2AP13861 404 aaKnown RBP9.71□□□□□ -0.86
U2AF1-212ENST00000496462 UTP14CQ5TAP6 766 aaKnown RBP9.71□□□□□ -0.86
U2AF1-212ENST00000496462 KANK3Q6NY19 840 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 SPATA33Q96N06 139 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 MXRA8Q9BRK3 442 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
U2AF1-212ENST00000496462 ADAMTS5Q9UNA0 930 aa9.71□□□□□ -0.86
U2AF1-212ENST00000496462 DGKDQ16760 1214 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 GNASQ5JWF2 1037 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 SEPT1Q8WYJ6 367 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 PHF20Q9BVI0 1012 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 PDE4DIPQ5VU43 2346 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 DDX39AO00148 427 aaKnown RBP9.7□□□□□ -0.86
U2AF1-212ENST00000496462 CHMP2AO43633 222 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 CCT6AP40227 531 aaKnown RBP9.7□□□□□ -0.86
U2AF1-212ENST00000496462 OTOP1Q7RTM1 612 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 KRI1Q8N9T8 703 aaKnown RBP9.7□□□□□ -0.86
U2AF1-212ENST00000496462 RIT2Q99578 217 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 SPTLC2O15270 562 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 TBCAO75347 108 aaKnown RBP9.7□□□□□ -0.86
U2AF1-212ENST00000496462 GGPS1O95749 300 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 SREBF1P36956 1147 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 MUM1L1Q5H9M0 696 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 MYSM1Q5VVJ2 828 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 ANO1Q5XXA6 986 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 SMAP1Q8IYB5 467 aaPredicted RBP9.7□□□□□ -0.86
U2AF1-212ENST00000496462 MTMR8Q96EF0 704 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 AK8Q96MA6 479 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 XPNPEP3Q9NQH7 507 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 SLC9A2Q9UBY0 812 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 NR2E3Q9Y5X4 410 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 NID2Q14112 1375 aa9.7□□□□□ -0.86
U2AF1-212ENST00000496462 ARHGEF35A5YM69 484 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 L1TD1Q5T7N2 865 aaKnown RBP9.69□□□□□ -0.86
U2AF1-212ENST00000496462 MAML3Q96JK9 1138 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 MTIF3Q9H2K0 278 aaKnown RBP9.69□□□□□ -0.86
U2AF1-212ENST00000496462 SMARCAD1Q9H4L7 1026 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 IPO5O00410 1097 aaKnown RBP9.69□□□□□ -0.86
U2AF1-212ENST00000496462 YEATS4O95619 227 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 INHAP05111 366 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 SUPT20HL2P0C7V6 817 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 HSD17B4P51659 736 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 SKOR2Q2VWA4 1001 aaPredicted RBP9.69□□□□□ -0.86
U2AF1-212ENST00000496462 Q3C1V9 767 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 C7orf31Q8N865 590 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 ARHGAP39Q9C0H5 1083 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 ZHX3Q9H4I2 956 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 JPH1Q9HDC5 661 aaPredicted RBP9.69□□□□□ -0.86
U2AF1-212ENST00000496462 JADE2Q9NQC1 790 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 PTPN22Q9Y2R2 807 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 SEPT4O43236 478 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 SMC2O95347 1197 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 MBD3O95983 291 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 STIM1Q13586 685 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 NTRK3Q16288 839 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 SLC30A10Q6XR72 485 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 RASGRP4Q8TDF6 673 aa9.69□□□□□ -0.86
U2AF1-212ENST00000496462 DCDC2CA8MYV0 355 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 SLC26A4O43511 780 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CYTH3O43739 400 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CLSTN1O94985 981 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 LARGE1O95461 756 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 TPM4P67936 248 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CDC42EP1Q00587 391 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 PGM5Q15124 567 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 ARL6IP4Q66PJ3 421 aaKnown RBP9.68□□□□□ -0.86
U2AF1-212ENST00000496462 IFT74Q96LB3 600 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 TXNRD2Q9NNW7 524 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CEP290O15078 2479 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 BAZ2AQ9UIF9 1905 aaKnown RBP9.68□□□□□ -0.86
U2AF1-212ENST00000496462 H0YCG3 227 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CYP2C19P33261 490 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 SLC26A2P50443 739 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 FAM133AQ8N9E0 248 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 PCDHA10Q9Y5I2 948 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 RRN3P2A6NIE6 340 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CNTN2Q02246 1040 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 VSIG10LQ86VR7 867 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 PGBD1Q96JS3 809 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 SENP7Q9BQF6 1050 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 MTG1Q9BT17 334 aaPredicted RBP9.68□□□□□ -0.86
U2AF1-212ENST00000496462 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.68□□□□□ -0.86
U2AF1-212ENST00000496462 Q9Y3F1 56 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 TACC3Q9Y6A5 838 aa9.68□□□□□ -0.86
U2AF1-212ENST00000496462 CUTAO60888 179 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 DUSP11O75319 330 aaKnown RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 ABCD1P33897 745 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 KIAA1755Q5JYT7 1200 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 NECAB2Q7Z6G3 386 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 LBHD1Q9BQE6 289 aaPredicted RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms