RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SPEF2Q9C093 1822 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 NEURL1BA8MQ27 555 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 KCNJ18B7U540 433 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 NTSR2O95665 410 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 CCT6AP40227 531 aaKnown RBP9.96□□□□□ -0.81
HPS4-217ENST00000496385 CARSP49589 748 aaKnown RBP9.96□□□□□ -0.81
HPS4-217ENST00000496385 UBXN1Q04323 297 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 DPYDQ12882 1025 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 KCNJ12Q14500 433 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 SPDYCQ5MJ68 293 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 ANKRD20A2Q5SQ80 823 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 ANKRD20A1Q5TYW2 823 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 ANKRD20A3Q5VUR7 823 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 PIGWQ7Z7B1 504 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 SESTD1Q86VW0 696 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 NOSTRINQ8IVI9 506 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 MB21D2Q8IYB1 491 aaPredicted RBP9.96□□□□□ -0.81
HPS4-217ENST00000496385 CFAP61Q8NHU2 1237 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 NCOA7Q8NI08 942 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 TEKT4Q8WW24 435 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.81
HPS4-217ENST00000496385 PLEKHG4BQ96PX9 1271 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 VPS16Q9H269 839 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 AATFQ9NY61 560 aaKnown RBP eCLIP9.96□□□□□ -0.81
HPS4-217ENST00000496385 DBNLQ9UJU6 430 aaKnown RBP9.96□□□□□ -0.81
HPS4-217ENST00000496385 NFU1Q9UMS0 254 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.96□□□□□ -0.81
HPS4-217ENST00000496385 L3MBTL1Q9Y468 752 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.81
HPS4-217ENST00000496385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.96□□□□□ -0.81
HPS4-217ENST00000496385 LGALS16A8MUM7 142 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 ZSCAN9O15535 394 aaPredicted RBP9.96□□□□□ -0.82
HPS4-217ENST00000496385 EEF1GP26641 437 aaKnown RBP9.96□□□□□ -0.82
HPS4-217ENST00000496385 HPDP32754 393 aaPredicted RBP9.96□□□□□ -0.82
HPS4-217ENST00000496385 STX17P56962 302 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 ZBED6P86452 979 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 CUL1Q13616 776 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
HPS4-217ENST00000496385 FIGNQ5HY92 759 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 ERMARDQ5T6L9 678 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 KLHL10Q6JEL2 608 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 SLC51AQ86UW1 340 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 SUCLG2Q96I99 432 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 SH2D4AQ9H788 454 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 NHEJ1Q9H9Q4 299 aaPredicted RBP9.96□□□□□ -0.82
HPS4-217ENST00000496385 EPB41L5Q9HCM4 733 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 PANK4Q9NVE7 773 aa9.96□□□□□ -0.82
HPS4-217ENST00000496385 ANKRD36CQ5JPF3 1778 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 H0YGN5 161 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 HEXIM1O94992 359 aaKnown RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 PYGLP06737 847 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 CDC25AP30304 524 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 DNM2P50570 870 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 MXRA7P84157 204 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 MKL1Q969V6 931 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 KAZALD1Q96I82 304 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 TRAPPC9Q96Q05 1148 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 SYT17Q9BSW7 474 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 FOXP1Q9H334 677 aaPredicted RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 NFS1Q9Y697 457 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 A0A1W2PQJ5 194 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 F8W031 263 aaPredicted RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 GLI1P08151 1106 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 ABL2P42684 1182 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 LACTBP83111 547 aaPredicted RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 PAK1Q13153 545 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 TAF11Q15544 211 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 GNPTABQ3T906 1256 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 NUGGCQ68CJ6 796 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 TRPM8Q7Z2W7 1104 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 RNF10Q8N5U6 811 aaKnown RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 ZNF507Q8TCN5 953 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 PAGE5Q96GU1 130 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 GJB4Q9NTQ9 266 aa9.95□□□□□ -0.82
HPS4-217ENST00000496385 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
HPS4-217ENST00000496385 RCCD1A6NED2 376 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 LCA5LO95447 670 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 BAG3O95817 575 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 FAM153BP0C7A2 387 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 SH3BGRP55822 239 aaPredicted RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 ATP11AP98196 1134 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 GCKRQ14397 625 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 FAM153CQ494X1 144 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 TBC1D1Q86TI0 1168 aaPredicted RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 XPO6Q96QU8 1125 aaKnown RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 FAM129AQ9BZQ8 928 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 TRIM4Q9C037 500 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 NSRP1Q9H0G5 558 aaKnown RBP9.94□□□□□ -0.82
HPS4-217ENST00000496385 ISCUQ9H1K1 167 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 VCXQ9H320 206 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 CCDC134Q9H6E4 229 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 RMND1Q9NWS8 449 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 TAB2Q9NYJ8 693 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 FAM153AQ9UHL3 310 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 DPPA5A6NC42 116 aa9.94□□□□□ -0.82
HPS4-217ENST00000496385 BMP15O95972 392 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms