RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PIK3AP1Q6ZUJ8 805 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 HEATR3Q7Z4Q2 680 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 FOXP4Q8IVH2 680 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-213ENST00000495693 ENOX1Q8TC92 643 aaKnown RBP9.73□□□□□ -0.85
EPHA4-213ENST00000495693 CLIC6Q96NY7 704 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
EPHA4-213ENST00000495693 LRRC27Q9C0I9 530 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 CSRNP2Q9H175 543 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 MTMR4Q9NYA4 1195 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 PI4KBQ9UBF8 816 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 HDAC9Q9UKV0 1011 aa9.73□□□□□ -0.85
EPHA4-213ENST00000495693 COL11A2P13942 1736 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-213ENST00000495693 STXBP3O00186 592 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 ENTPD3O75355 529 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 SERPINC1P01008 464 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 SNHG28P0DPA3 235 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 ATP2B1P20020 1258 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 BAG6P46379 1132 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 SARSP49591 514 aaKnown RBP9.72□□□□□ -0.85
EPHA4-213ENST00000495693 AMPD3Q01432 767 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 SPAG1Q07617 926 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 PTK7Q13308 1070 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 STIM1Q13586 685 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 LBRQ14739 615 aaKnown RBP9.72□□□□□ -0.85
EPHA4-213ENST00000495693 TMEM266Q2M3C6 531 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 CCDC186Q7Z3E2 898 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 METTL16Q86W50 562 aaKnown RBP9.72□□□□□ -0.85
EPHA4-213ENST00000495693 SPC24Q8NBT2 197 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 C1orf216Q8TAB5 229 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 SPATA20Q8TB22 786 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 KIAA1524Q8TCG1 905 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 DCAF4Q8WV16 495 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 CEP95Q96GE4 821 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 GPR101Q96P66 508 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-213ENST00000495693 RIOX1Q9H6W3 641 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 CUEDC1Q9NWM3 386 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-213ENST00000495693 PCDHA5Q9Y5H7 936 aa9.72□□□□□ -0.85
EPHA4-213ENST00000495693 IGKV6D-41A0A0C4DH26 115 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 ECE2O60344 883 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 PDHBP11177 359 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 GCFC2P16383 781 aaKnown RBP9.71□□□□□ -0.86
EPHA4-213ENST00000495693 SFPQP23246 707 aaKnown RBP eCLIP9.71□□□□□ -0.86
EPHA4-213ENST00000495693 ADCY7P51828 1080 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 MRPL12P52815 198 aaKnown RBP9.71□□□□□ -0.86
EPHA4-213ENST00000495693 PICALMQ13492 652 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 PNOCQ13519 176 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 MORC3Q14149 939 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 ZNF174Q15697 407 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 NPY5RQ15761 445 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 GRIK5Q16478 980 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 FILIP1LQ4L180 1135 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 TMEM179Q6ZVK1 233 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 NEK8Q86SG6 692 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 REXO1Q8N1G1 1221 aaKnown RBP9.71□□□□□ -0.86
EPHA4-213ENST00000495693 RASSF8Q8NHQ8 419 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 DHX58Q96C10 678 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 KANSL2Q9H9L4 492 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 NYAP2Q9P242 653 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 MYH8P13535 1937 aa9.71□□□□□ -0.86
EPHA4-213ENST00000495693 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 SMCO2A6NFE2 343 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 UBE2Q2LH0YL09 131 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 TPM1P09493 284 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 MCM7P33993 719 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 UBA7P41226 1012 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 STAT6P42226 847 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 UBASH3AP57075 661 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 CFAP100Q494V2 611 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 CRTC2Q53ET0 693 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 DACT2Q5SW24 774 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 CDC42EP5Q6NZY7 148 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 MTERF4Q7Z6M4 381 aaKnown RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 LRRC8AQ8IWT6 810 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 VWA5B2Q8N398 1253 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 GPR161Q8N6U8 529 aaKnown RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 MKL1Q969V6 931 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 ZNF837Q96EG3 531 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 PSMD1Q99460 953 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 KCND1Q9NSA2 647 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 HERC5Q9UII4 1024 aaKnown RBP9.7□□□□□ -0.86
EPHA4-213ENST00000495693 MAN1B1Q9UKM7 699 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 PCDHA6Q9UN73 950 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 PCDHA8Q9Y5H6 950 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 ATRNL1Q5VV63 1379 aa9.7□□□□□ -0.86
EPHA4-213ENST00000495693 GOLGA6L9A6NEM1 432 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 F8W031 263 aaPredicted RBP9.69□□□□□ -0.86
EPHA4-213ENST00000495693 BIN1O00499 593 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 AP5Z1O43299 807 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 PTGS1P23219 599 aa9.69□□□□□ -0.86
EPHA4-213ENST00000495693 PHKA2P46019 1235 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms