RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 V9GY48 417 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-232ENST00000495434 FIBPO43427 364 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 GGPS1O95749 300 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
MRPL55-232ENST00000495434 SP2Q02086 613 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 NEDD9Q14511 834 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-232ENST00000495434 RUFY3Q7L099 469 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 KAT2BQ92831 832 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 SPATA33Q96N06 139 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 SENP7Q9BQF6 1050 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 TRMT13Q9NUP7 481 aaKnown RBP16.11■□□□□ 0.17
MRPL55-232ENST00000495434 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
MRPL55-232ENST00000495434 SPDYE3A6NKU9 549 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 F2P00734 622 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 CSF2RAP15509 400 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 CYP2C18P33260 490 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
MRPL55-232ENST00000495434 NAPAP54920 295 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 SMAD3P84022 425 aaKnown RBP16.1■□□□□ 0.17
MRPL55-232ENST00000495434 HSDL1Q3SXM5 330 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 FAM47CQ5HY64 1035 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 NLRX1Q86UT6 975 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MRPL55-232ENST00000495434 GPRASP2Q96D09 838 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
MRPL55-232ENST00000495434 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 IL23AQ9NPF7 189 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 RIC8AQ9NPQ8 531 aa16.1■□□□□ 0.17
MRPL55-232ENST00000495434 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-232ENST00000495434 STXBP3O00186 592 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 HAS3O00219 553 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 MAFGO15525 162 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
MRPL55-232ENST00000495434 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-232ENST00000495434 SEMA3FQ13275 785 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 UBE2SQ16763 222 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 PFKFB3Q16875 520 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-232ENST00000495434 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 PSRC1Q6PGN9 363 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-232ENST00000495434 METTL7BQ6UX53 244 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 GIMAP8Q8ND71 665 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-232ENST00000495434 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-232ENST00000495434 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.09■□□□□ 0.172e-7■■■□□ 15.4
MRPL55-232ENST00000495434 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
MRPL55-232ENST00000495434 PRPF3O43395 683 aaKnown RBP16.08■□□□□ 0.16
MRPL55-232ENST00000495434 CYP2C9P11712 490 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 PSEN2P49810 448 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 ADCY7P51828 1080 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 BFSP2Q13515 415 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 MFSD10Q14728 455 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 RASIP1Q5U651 963 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 TYW1BQ6NUM6 668 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 RPUSD2Q8IZ73 545 aaKnown RBP16.08■□□□□ 0.16
MRPL55-232ENST00000495434 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 WNT8AQ9H1J5 351 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 GTF2IRD1Q9UHL9 959 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 UBIAD1Q9Y5Z9 338 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 UMODL1Q5DID0 1318 aa16.08■□□□□ 0.16
MRPL55-232ENST00000495434 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-232ENST00000495434 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-232ENST00000495434 ESYT2A0FGR8 921 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 PFKMP08237 780 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 SCG2P13521 617 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 PDIA3P30101 505 aaKnown RBP16.07■□□□□ 0.16
MRPL55-232ENST00000495434 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 PTGISQ16647 500 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 KIAA0753Q2KHM9 967 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 CYFIP1Q7L576 1253 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 CAGE1Q8TC20 777 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-232ENST00000495434 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 C16orf70Q9BSU1 422 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
MRPL55-232ENST00000495434 NOP56O00567 594 aaKnown RBP16.06■□□□□ 0.16
MRPL55-232ENST00000495434 FGBP02675 491 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 ZNF286BP0CG31 522 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 IFNAR1P17181 557 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 ITGB5P18084 799 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 RFC2P35250 354 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 CLK2P49760 499 aaKnown RBP16.06■□□□□ 0.16
MRPL55-232ENST00000495434 CCL23P55773 120 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 RBL2Q08999 1139 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-232ENST00000495434 NTRK3Q16288 839 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 GDF6Q6KF10 455 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-232ENST00000495434 ZNF365Q70YC5 407 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 CCDC155Q8N6L0 562 aa16.06■□□□□ 0.16
MRPL55-232ENST00000495434 RETREG2Q8NC44 543 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms