RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 EDEM3Q9BZQ6 932 aa16.95■□□□□ 0.3
SDF4-207ENST00000494748 NAV1Q8NEY1 1877 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 ADAMTS2O95450 1211 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 GALNT17Q6IS24 598 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 FAM228AQ86W67 206 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 KLC4Q9NSK0 619 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 QPCTQ16769 361 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 MICALCLQ6ZW33 695 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 USP38Q8NB14 1042 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 MCM8Q9UJA3 840 aa16.94■□□□□ 0.3
SDF4-207ENST00000494748 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 HSD17B3P37058 310 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 IFT88Q13099 833 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 INTS5Q6P9B9 1019 aaKnown RBP16.93■□□□□ 0.3
SDF4-207ENST00000494748 GUF1Q8N442 669 aaKnown RBP16.93■□□□□ 0.3
SDF4-207ENST00000494748 SLC40A1Q9NP59 571 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 TCP11L1Q9NUJ3 509 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 C21orf2O43822 256 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 ERCC3P19447 782 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 CCDC40Q4G0X9 1142 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 PREPLQ4J6C6 727 aaPredicted RBP16.93■□□□□ 0.3
SDF4-207ENST00000494748 ZCWPW2Q504Y3 356 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 WLSQ5T9L3 541 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 UNC13DQ70J99 1090 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 PACSIN1Q9BY11 444 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 ZMYND12Q9H0C1 365 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 NEUROG2Q9H2A3 272 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 DDX20Q9UHI6 824 aaKnown RBP16.93■□□□□ 0.3
SDF4-207ENST00000494748 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 EDIL3O43854 480 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 KLRK1P26718 216 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 TECP42680 631 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 LRIG3Q6UXM1 1119 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 ARHGAP27Q6ZUM4 889 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 RPAINQ86UA6 219 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 SYN2Q92777 582 aaPredicted RBP16.93■□□□□ 0.3
SDF4-207ENST00000494748 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
SDF4-207ENST00000494748 ISCUQ9H1K1 167 aa16.93■□□□□ 0.3
SDF4-207ENST00000494748 DNM1LO00429 736 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 CEP85LQ5SZL2 805 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 CADPS2Q86UW7 1296 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 EIF1ADQ8N9N8 165 aaKnown RBP16.92■□□□□ 0.3
SDF4-207ENST00000494748 ATP8A2Q9NTI2 1148 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 ARPP21Q9UBL0 812 aaPredicted RBP16.92■□□□□ 0.3
SDF4-207ENST00000494748 SBF2Q86WG5 1849 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 ZNF844Q08AG5 666 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 DRP2Q13474 957 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 OR2W6PQ8NHA6 318 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 TAF1DQ9H5J8 278 aaPredicted RBP16.92■□□□□ 0.3
SDF4-207ENST00000494748 CEP72Q9P209 647 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 E7EVH7 732 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 CHUKO15111 745 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 TRAPPC3O43617 180 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 CCNT1O60563 726 aaKnown RBP16.92■□□□□ 0.3
SDF4-207ENST00000494748 LRRC63Q05C16 580 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 LRRC4CQ9HCJ2 640 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
SDF4-207ENST00000494748 ARFGEF1Q9Y6D6 1849 aa16.92■□□□□ 0.3
SDF4-207ENST00000494748 PVALEFA0A1B0GWK0 134 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 PALM3A6NDB9 673 aaPredicted RBP16.91■□□□□ 0.3
SDF4-207ENST00000494748 C5orf60A6NFR6 353 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 H0YHG0 523 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 SERPING1P05155 500 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 TFAP4Q01664 338 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 UBE4AQ14139 1066 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 SCFD2Q8WU76 684 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 NLRC4Q9NPP4 1024 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 A0A087X0T9 212 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 FAM228BP0C875 321 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 DNA2P51530 1060 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 LETM2Q2VYF4 491 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 DDX60LQ5H9U9 1706 aaKnown RBP16.91■□□□□ 0.3
SDF4-207ENST00000494748 FOXR2Q6PJQ5 311 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 MTMR9Q96QG7 549 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 AMPD3Q01432 767 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 FAM83BQ5T0W9 1011 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
SDF4-207ENST00000494748 PAEPP09466 180 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 RNASE9P60153 205 aaKnown RBP16.9■□□□□ 0.3
SDF4-207ENST00000494748 SLC18A3Q16572 532 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 RNF187Q5TA31 235 aaPredicted RBP16.9■□□□□ 0.3
SDF4-207ENST00000494748 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 ROBO3Q96MS0 1386 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 CES2O00748 559 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 FLT3P36888 993 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 DPY19L2P1Q6NXN4 242 aa16.9■□□□□ 0.3
SDF4-207ENST00000494748 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms