RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 PI4K2BG5E9Z4 385 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 GPR37L1O60883 481 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 CXCL10P02778 98 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 ERVK-21P61565 698 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 RAD9AQ99638 391 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 USP34Q70CQ2 3546 aa13.65□□□□□ -0.22
CSNK1E-212ENST00000494610 H3BQ06 376 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 SEC24BO95487 1268 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 MFSD10Q14728 455 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 KIAA0753Q2KHM9 967 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 QRICH1Q2TAL8 776 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 ALYREFQ86V81 257 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 C7orf31Q8N865 590 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 GPKOWQ92917 476 aaPredicted RBP eCLIP13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 MYH6P13533 1939 aa13.64□□□□□ -0.23
CSNK1E-212ENST00000494610 OPLAHO14841 1288 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 RGS20O76081 388 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 SP2Q02086 613 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 KRT32Q14532 448 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 GJD3Q8N144 294 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 CCDC155Q8N6L0 562 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 DBF4BQ8NFT6 615 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 TELO2Q9Y4R8 837 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 MICAL3Q7RTP6 2002 aa13.63□□□□□ -0.23
CSNK1E-212ENST00000494610 ABHD14A-ACY1A0A1B0GW23 586 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 HAS3O00219 553 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 LGR5O75473 907 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 MYCLP12524 364 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 SSTR3P32745 418 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 HSPA4P34932 840 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 RBL2Q08999 1139 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 IKBKEQ14164 716 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 STXBP2Q15833 593 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 DGKDQ16760 1214 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 HSDL1Q3SXM5 330 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 ARHGEF16Q5VV41 709 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 PTCRAQ6ISU1 281 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 MYOCDQ8IZQ8 938 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 PNMA1Q8ND90 353 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 RGS22Q8NE09 1264 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 IL31RAQ8NI17 732 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 NSUN6Q8TEA1 469 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 UIMC1Q96RL1 719 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 IL25Q9H293 177 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 MRVI1Q9Y6F6 885 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
CSNK1E-212ENST00000494610 KDM4AO75164 1064 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 UPP2O95045 317 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 CSPG5O95196 566 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 F2P00734 622 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 CFBP00751 764 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 NR3C2P08235 984 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 HOXA13P31271 388 aaPredicted RBP13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 THPOP40225 353 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 PTK7Q13308 1070 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 EP400NLQ6ZTU2 488 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 DHX37Q8IY37 1157 aaKnown RBP13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 TTC14Q96N46 770 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 PXMP2Q9NR77 195 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 ABCB11O95342 1321 aa13.61□□□□□ -0.23
CSNK1E-212ENST00000494610 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 B4E1Z4 1266 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 CTSHP09668 335 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 PSMA5P28066 241 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 NT5C2P49902 561 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 PTH1RQ03431 593 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 RABEP1Q15276 862 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 EPC2Q52LR7 807 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 FBXO11Q86XK2 927 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 IL17RAQ96F46 866 aa13.6□□□□□ -0.23
CSNK1E-212ENST00000494610 BAZ2BQ9UIF8 2168 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms