RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 METAP2P50579 478 aaKnown RBP eCLIP38.18■■■■□ 3.78e-7■□□□□ 9.4
CBX4-203ENST00000494546 PTPN11Q06124 597 aaPredicted RBP38.18■■■■□ 3.7
CBX4-203ENST00000494546 PCNX4Q63HM2 1172 aa38.18■■■■□ 3.7
CBX4-203ENST00000494546 INPP4AQ96PE3 977 aaPredicted RBP38.18■■■■□ 3.7
CBX4-203ENST00000494546 MLXIPQ9HAP2 919 aa38.18■■■■□ 3.7
CBX4-203ENST00000494546 EPB41L2O43491 1005 aaKnown RBP38.17■■■■□ 3.7
CBX4-203ENST00000494546 C16orf59Q7L2K0 433 aa38.17■■■■□ 3.7
CBX4-203ENST00000494546 ZNF286BP0CG31 522 aa38.16■■■■□ 3.7
CBX4-203ENST00000494546 NAPAP54920 295 aa38.16■■■■□ 3.7
CBX4-203ENST00000494546 ICAM3P32942 547 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 ADD1P35611 737 aaKnown RBP38.15■■■■□ 3.7
CBX4-203ENST00000494546 HSDL1Q3SXM5 330 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 XRRA1Q6P2D8 792 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 USP26Q9BXU7 913 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 WNT8AQ9H1J5 351 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 IL23AQ9NPF7 189 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 NOD1Q9Y239 953 aa38.15■■■■□ 3.7
CBX4-203ENST00000494546 SPDYE3A6NKU9 549 aa38.14■■■■□ 3.7
CBX4-203ENST00000494546 SPATA31C2B4DYI2 1134 aa38.14■■■■□ 3.7
CBX4-203ENST00000494546 FIBPO43427 364 aa38.14■■■■□ 3.7
CBX4-203ENST00000494546 TMEM240Q5SV17 173 aa38.14■■■■□ 3.7
CBX4-203ENST00000494546 MYH7BA7E2Y1 1941 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 CCDC196A0A1B0GTZ2 297 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 PSEN2P49810 448 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 PSRC1Q6PGN9 363 aaPredicted RBP38.13■■■■□ 3.69
CBX4-203ENST00000494546 ZNF365Q70YC5 407 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 ALG1Q9BT22 464 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 KATNAL1Q9BW62 490 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 BCAS3Q9H6U6 928 aa38.13■■■■□ 3.69
CBX4-203ENST00000494546 PPFIA4O75335 1185 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 SEMA3FQ13275 785 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 TYW1BQ6NUM6 668 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 FBXL16Q8N461 479 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 SCLYQ96I15 445 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 PCDHA6Q9UN73 950 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 PCDHA8Q9Y5H6 950 aa38.12■■■■□ 3.69
CBX4-203ENST00000494546 HOXD8P13378 290 aaPredicted RBP38.11■■■■□ 3.69
CBX4-203ENST00000494546 SMAD3P84022 425 aaKnown RBP38.11■■■■□ 3.69
CBX4-203ENST00000494546 NEDD9Q14511 834 aa38.11■■■■□ 3.69
CBX4-203ENST00000494546 MFSD10Q14728 455 aa38.11■■■■□ 3.69
CBX4-203ENST00000494546 PTGISQ16647 500 aa38.11■■■■□ 3.69
CBX4-203ENST00000494546 PPP1R18Q6NYC8 613 aa38.11■■■■□ 3.69
CBX4-203ENST00000494546 NLRX1Q86UT6 975 aa38.11■■■■□ 3.69
CBX4-203ENST00000494546 AGXT2Q9BYV1 514 aa38.11■■■■□ 3.69
CBX4-203ENST00000494546 STXBP3O00186 592 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 F2P00734 622 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 KIAA0753Q2KHM9 967 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 RUFY3Q7L099 469 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 CYFIP1Q7L576 1253 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 SESTD1Q86VW0 696 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 C7orf31Q8N865 590 aa38.1■■■■□ 3.69
CBX4-203ENST00000494546 hCG_1984214I3L0E3 225 aa38.09■■■■□ 3.69
CBX4-203ENST00000494546 NOP56O00567 594 aaKnown RBP38.09■■■■□ 3.69
CBX4-203ENST00000494546 GDF6Q6KF10 455 aaPredicted RBP38.09■■■■□ 3.69
CBX4-203ENST00000494546 ZNF713Q8N859 430 aaPredicted RBP38.09■■■■□ 3.69
CBX4-203ENST00000494546 ZSWIM6Q9HCJ5 1215 aa38.09■■■■□ 3.69
CBX4-203ENST00000494546 RIC8AQ9NPQ8 531 aa38.09■■■■□ 3.69
CBX4-203ENST00000494546 BARHL2Q9NY43 387 aa38.09■■■■□ 3.69
CBX4-203ENST00000494546 ADCY7P51828 1080 aa38.08■■■■□ 3.69
CBX4-203ENST00000494546 METTL7BQ6UX53 244 aa38.08■■■■□ 3.69
CBX4-203ENST00000494546 EHMT1Q9H9B1 1298 aa38.08■■■■□ 3.69
CBX4-203ENST00000494546 MTMR10Q9NXD2 777 aa38.08■■■■□ 3.69
CBX4-203ENST00000494546 HDAC6Q9UBN7 1215 aa38.08■■■■□ 3.69
CBX4-203ENST00000494546 SMCO2A6NFE2 343 aa38.07■■■■□ 3.68
CBX4-203ENST00000494546 HAS3O00219 553 aa38.07■■■■□ 3.68
CBX4-203ENST00000494546 FGBP02675 491 aa38.07■■■■□ 3.68
CBX4-203ENST00000494546 ZNF697Q5TEC3 545 aa38.07■■■■□ 3.68
CBX4-203ENST00000494546 FAM109BQ6ICB4 259 aaPredicted RBP38.07■■■■□ 3.68
CBX4-203ENST00000494546 GTF2IRD1Q9UHL9 959 aa38.07■■■■□ 3.68
CBX4-203ENST00000494546 CYP46A1Q9Y6A2 500 aa38.07■■■■□ 3.68
CBX4-203ENST00000494546 BFSP2Q13515 415 aa38.06■■■■□ 3.68
CBX4-203ENST00000494546 RPUSD2Q8IZ73 545 aaKnown RBP38.06■■■■□ 3.68
CBX4-203ENST00000494546 RETREG2Q8NC44 543 aa38.06■■■■□ 3.68
CBX4-203ENST00000494546 GPRASP2Q96D09 838 aa38.06■■■■□ 3.68
CBX4-203ENST00000494546 FAM161BQ96MY7 647 aa38.06■■■■□ 3.68
CBX4-203ENST00000494546 NID2Q14112 1375 aa38.06■■■■□ 3.68
CBX4-203ENST00000494546 HSFX4A0A1B0GTS1 333 aaPredicted RBP38.05■■■■□ 3.68
CBX4-203ENST00000494546 HSFX3A0A1B0GWH4 333 aaPredicted RBP38.05■■■■□ 3.68
CBX4-203ENST00000494546 PFKFB3Q16875 520 aaPredicted RBP38.05■■■■□ 3.68
CBX4-203ENST00000494546 PGBD1Q96JS3 809 aa38.05■■■■□ 3.68
CBX4-203ENST00000494546 C16orf70Q9BSU1 422 aa38.05■■■■□ 3.68
CBX4-203ENST00000494546 SCG2P13521 617 aa38.04■■■■□ 3.68
CBX4-203ENST00000494546 ITGB5P18084 799 aa38.04■■■■□ 3.68
CBX4-203ENST00000494546 SP4Q02446 784 aa38.04■■■■□ 3.68
CBX4-203ENST00000494546 CDHR1Q96JP9 859 aa38.04■■■■□ 3.68
CBX4-203ENST00000494546 SENP7Q9BQF6 1050 aa38.04■■■■□ 3.68
CBX4-203ENST00000494546 UPF3BQ9BZI7 483 aaKnown RBP38.04■■■■□ 3.68
CBX4-203ENST00000494546 PITPNM1O00562 1244 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 LGALS2P05162 132 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 RASIP1Q5U651 963 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 OTOP2Q7RTS6 562 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 DEFB128Q7Z7B8 93 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 HERVK_113Q902F9 699 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 CTAGE1Q96RT6 745 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 GPR20Q99678 358 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 UBIAD1Q9Y5Z9 338 aa38.03■■■■□ 3.68
CBX4-203ENST00000494546 PPFIA3O75145 1194 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 PDIA3P30101 505 aaKnown RBP38.02■■■■□ 3.68
CBX4-203ENST00000494546 CCT2P78371 535 aaKnown RBP38.02■■■■□ 3.68
CBX4-203ENST00000494546 TOB2Q14106 344 aaPredicted RBP38.02■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms