RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 DLG4P78352 724 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 DUSP4Q13115 394 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 HSF5Q4G112 596 aaPredicted RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 IRF2BP1Q8IU81 584 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 DHX38Q92620 1227 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 FCRL2Q96LA5 508 aaPredicted RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 JMJD8Q96S16 334 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 RXFP1Q9HBX9 757 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 GP6Q9HCN6 339 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 SMG5Q9UPR3 1016 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 DDX60LQ5H9U9 1706 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 EPHX1P07099 455 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 VAV1P15498 845 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 BMP8BP34820 402 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 PPP2R5DQ14738 602 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 C7orf61Q8IZ16 206 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 FGD4Q96M96 766 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 PUS7Q96PZ0 661 aaKnown RBP3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 HAUS7Q99871 368 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 TCHHQ07283 1943 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 SLIT1O75093 1534 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 NUP155O75694 1391 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 LY75O60449 1722 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 SSU72P8A0A1W2PR75 194 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 NUDT19A8MXV4 375 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF205O95201 554 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 PRKCAP17252 672 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 ITGAEP38570 1179 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 NASPP49321 788 aaPredicted RBP3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 SLC14A2Q15849 920 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 PPP2R5EQ16537 467 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 LRRFIP1Q32MZ4 808 aaKnown RBP3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 SLCO6A1Q86UG4 719 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 ENOX1Q8TC92 643 aaKnown RBP3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 GPRASP2Q96D09 838 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 CCDC120Q96HB5 630 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 SLC12A9Q9BXP2 914 aa3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 CWC22Q9HCG8 908 aaKnown RBP3.34□□□□□ -1.87
CDC42EP3-205ENST00000494083 STXBP3O00186 592 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 GSTM1P09488 218 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 CD247P20963 164 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 VIPR1P32241 457 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 CHRNEQ04844 493 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 LILRA2Q8N149 483 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 FCRL3Q96P31 734 aaPredicted RBP3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 TM9SF2Q99805 663 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 SLC6A17Q9H1V8 727 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 APEX2Q9UBZ4 518 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 SBF2Q86WG5 1849 aa3.34□□□□□ -1.88
CDC42EP3-205ENST00000494083 NHSQ6T4R5 1651 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 CD3EP07766 207 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 GLDCP23378 1020 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 SOX9P48436 509 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 NOL9Q5SY16 702 aaKnown RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 KLHL6Q8WZ60 621 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 SYTL4Q96C24 671 aaPredicted RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 SHDQ96IW2 340 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 TAF6LQ9Y6J9 622 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 KIF24Q5T7B8 1368 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 TONSLQ96HA7 1378 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 TNRC6CQ9HCJ0 1690 aaKnown RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 XIRP1Q702N8 1843 aaKnown RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 NRDCO43847 1150 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 NUAK1O60285 661 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 MED14OSP0DP75 135 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 GJA8P48165 433 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 VMACQ2NL98 169 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 INTS3Q68E01 1043 aaKnown RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 ANKLE2Q86XL3 938 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 NUP43Q8NFH3 380 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 MBD1Q9UIS9 605 aaPredicted RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 ZNF214Q9UL59 606 aaPredicted RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 MRVI1Q9Y6F6 885 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 FOCADQ5VW36 1801 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 TCAF2A6NFQ2 919 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 HSP90AB1P08238 724 aaKnown RBP3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 TMEM253P0C7T8 217 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 DPY19L1Q2PZI1 675 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 BCAS3Q9H6U6 928 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 CGNL1Q0VF96 1302 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 KIF16BQ96L93 1317 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 TMEM94Q12767 1356 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 ADAMTS20P59510 1910 aa3.33□□□□□ -1.88
CDC42EP3-205ENST00000494083 LRP6O75581 1613 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 A0A1W2PQH9 124 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 OR14I1A6ND48 311 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 PI3P19957 117 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 SRSF3P84103 164 aaKnown RBP3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 RALBP1Q15311 655 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 GNPTABQ3T906 1256 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 PDLIM2Q96JY6 352 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 PPP1R9BQ96SB3 815 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 PPP1R16BQ96T49 567 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 ZNF552Q9H707 407 aaPredicted RBP3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 EPB41L4AQ9HCS5 686 aaPredicted RBP3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 VAMP4O75379 141 aa3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 GTF2F1P35269 517 aaKnown RBP eCLIP3.32□□□□□ -1.88
CDC42EP3-205ENST00000494083 SPPL2CQ8IUH8 684 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms