RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DNAJC19Q96DA6 116 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 HOOK2Q96ED9 719 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 GGA3Q9NZ52 723 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 ZNF112Q9UJU3 913 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 CCPG1Q9ULG6 757 aa11.91□□□□□ -0.5
CLCN6-208ENST00000494028 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 H7C1D1 291 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 NRDCO43847 1150 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 MFAP3LO75121 409 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 HOXA7P31268 230 aaPredicted RBP11.9□□□□□ -0.5
CLCN6-208ENST00000494028 HSD17B4P51659 736 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 MTMR2Q13614 643 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 FILIP1LQ4L180 1135 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 DYMQ7RTS9 669 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 CLEC4DQ8WXI8 215 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 DDX12PQ92771 950 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 FAM20AQ96MK3 541 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 EHMT1Q9H9B1 1298 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 GPRC5DQ9NZD1 345 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 MYH11P35749 1972 aa11.9□□□□□ -0.5
CLCN6-208ENST00000494028 BICDL2A1A5D9 508 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 E9PMD0 336 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 GYPCP04921 128 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 CYP11B2P19099 503 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 FECHP22830 423 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
CLCN6-208ENST00000494028 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-208ENST00000494028 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 GUF1Q8N442 669 aaKnown RBP11.89□□□□□ -0.51
CLCN6-208ENST00000494028 ANKRD20A12PQ8NF67 263 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 CYP2W1Q8TAV3 490 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 SLC5A5Q92911 643 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 CNOT6LQ96LI5 555 aaKnown RBP11.89□□□□□ -0.51
CLCN6-208ENST00000494028 C12orf42Q96LP6 360 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 PRIMPOLQ96LW4 560 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 COL20A1Q9P218 1284 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 PPP1R9AQ9ULJ8 1098 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
CLCN6-208ENST00000494028 KIAA1217Q5T5P2 1943 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 GOLGB1Q14789 3259 aaKnown RBP11.88□□□□□ -0.51
CLCN6-208ENST00000494028 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 FRMD3A2A2Y4 597 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 NFIBO00712 420 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 UQCRHP07919 91 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 SPATA31C1P0DKV0 1188 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 IDEP14735 1019 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 LMNB1P20700 586 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 RPA1P27694 616 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 SLC12A3P55017 1021 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 UBXN2AP68543 259 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 SETQ01105 290 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-208ENST00000494028 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 FAM26FQ5R3K3 315 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 NOL9Q5SY16 702 aaKnown RBP11.88□□□□□ -0.51
CLCN6-208ENST00000494028 CEP135Q66GS9 1140 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 FOXR2Q6PJQ5 311 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 GPC2Q8N158 579 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 CSGALNACT2Q8N6G5 542 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 GLIS3Q8NEA6 775 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 IL31RAQ8NI17 732 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 FGFBP2Q9BYJ0 223 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 TANGO6Q9C0B7 1094 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 SEMA6BQ9H3T3 888 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 RPAP3Q9H6T3 665 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-208ENST00000494028 SLC38A10Q9HBR0 1119 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 EMILIN3Q9NT22 766 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 DOCK5Q9H7D0 1870 aa11.88□□□□□ -0.51
CLCN6-208ENST00000494028 PITPNM2Q9BZ72 1349 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 LRRC10BA6NIK2 292 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 AKR1B15C9JRZ8 316 aaPredicted RBP11.87□□□□□ -0.51
CLCN6-208ENST00000494028 EML1O00423 815 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 N4BP3O15049 544 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 ARHGAP6O43182 974 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 PSMD10O75832 226 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN6-208ENST00000494028 TNNT1P13805 278 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 ZNF76P36508 570 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 USP14P54578 494 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
CLCN6-208ENST00000494028 PPP2R5CQ13362 524 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 TRIM14Q14142 442 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 CENPPQ6IPU0 288 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 CATSPER3Q86XQ3 398 aa11.87□□□□□ -0.51
CLCN6-208ENST00000494028 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
CLCN6-208ENST00000494028 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms