RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 DNAJC6O75061 913 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ITGA6P23229 1130 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 TECP42680 631 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 DHX9Q08211 1270 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 DRP2Q13474 957 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 PARP10Q53GL7 1025 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 HIPK4Q8NE63 616 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 PBKQ96KB5 322 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 MRPS26Q9BYN8 205 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 FNDC3AQ9Y2H6 1198 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 WDR91A4D1P6 747 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 HIF1AQ16665 826 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 RGS9BPQ6ZS82 235 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 TBK1Q9UHD2 729 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 TRIM33Q9UPN9 1127 aa8.48□□□□□ -1.05
BRCA1-221ENST00000493795 APOBEC2Q9Y235 224 aaKnown RBP8.48□□□□□ -1.05
BRCA1-221ENST00000493795 ARHGEF37A1IGU5 675 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 LRRIQ4A6NIV6 560 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 GYG2O15488 501 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ZSCAN9O15535 394 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 RPN1P04843 607 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 RWDD2BP57060 319 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 IMPG1Q17R60 797 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 SPATA1Q5VX52 437 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 LRRC8BQ6P9F7 803 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 LRRC8AQ8IWT6 810 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 C8orf58Q8NAV2 365 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 B4GALNT2Q8NHY0 566 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 FAM149B1Q96BN6 582 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 TESK2Q96S53 571 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 SUGCTQ9HAC7 445 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 MRPL47Q9HD33 250 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 IGF1RP08069 1367 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 FGD5Q6ZNL6 1462 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ORC4O43929 436 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 OR52Z1P0C646 297 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 DDIT3P35638 169 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 NSUN2Q08J23 767 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 WDR75Q8IWA0 830 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 NEK9Q8TD19 979 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 GANCQ8TET4 914 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 MAGEF1Q9HAY2 307 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 DDX25Q9UHL0 483 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ZNF711Q9Y462 761 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ACEP12821 1306 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 RNF103-CHMP3A0A140T963 221 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 KPNA7A9QM74 516 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 H0Y626 953 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 TRIM16O95361 564 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 HSPA1AP0DMV8 641 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 HSPA1BP0DMV9 641 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 DYNLT1P63172 113 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ADCY2Q08462 1091 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 DMTNQ08495 405 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 PRKG1Q13976 671 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 CATSPER3Q86XQ3 398 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 BLIDQ8IZY5 108 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 PSTPIP2Q9H939 334 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ARPP21Q9UBL0 812 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 LRFN2Q9ULH4 789 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 PCDHA12Q9UN75 941 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 CCDC78A2IDD5 438 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ANXA13P27216 316 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 GALNT17Q6IS24 598 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 DNAJC24Q6P3W2 148 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 CENPUQ71F23 418 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 ANO5Q75V66 913 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 CACTINQ8WUQ7 758 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 GCNAQ96QF7 691 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 YIPF3Q9GZM5 350 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 FBXO2Q9UK22 296 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 WDR7Q9Y4E6 1490 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 KRT87PA6NCN2 255 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 SYNDIG1LA6NDD5 238 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 PRPSAP2O60256 369 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 IL2RBP14784 551 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 SLCO1A2P46721 670 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 AP2B1P63010 937 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 PABPC4Q13310 644 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 CEP78Q5JTW2 689 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 C1orf146Q5VVC0 180 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 FAM173BQ6P4H8 233 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 HDDC2Q7Z4H3 204 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 TBC1D1Q86TI0 1168 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 MTRQ99707 1265 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 APOL6Q9BWW8 343 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
BRCA1-221ENST00000493795 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 DMRT2Q9Y5R5 561 aa8.47□□□□□ -1.05
BRCA1-221ENST00000493795 WDR97A6NE52 1622 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 284.1 ms