RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 POTEIP0CG38 1075 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 POTEJP0CG39 1038 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ME1P48163 572 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CD151P48509 253 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 MNAT1P51948 309 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 GHRHRQ02643 423 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 NEDD9Q14511 834 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CRYMQ14894 314 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 DLK2Q6UY11 383 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 GBP6Q6ZN66 633 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CATSPERGQ6ZRH7 1159 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 FERMT2Q96AC1 680 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 C16orf45Q96MC5 204 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 FBXO28Q9NVF7 368 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 MAP3K20Q9NYL2 800 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 CPSF2Q9P2I0 782 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 PCDHA7Q9UN72 937 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 ADAMTS5Q9UNA0 930 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 PCDHB6Q9Y5E3 794 aa8.09□□□□□ -1.11
SMARCE1-211ENST00000493660 FAM237AA0A1B0GTK4 181 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ATP2A1O14983 1001 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ADAMTS3O15072 1205 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 PPFIA2O75334 1257 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 PTPREP23469 700 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 HOXA7P31268 230 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 MAGEA8P43361 318 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ATP2C1P98194 919 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 COG2Q14746 738 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ARL6IP4Q66PJ3 421 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CHADLQ6NUI6 762 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 TMCO3Q6UWJ1 677 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 DNAJC14Q6Y2X3 702 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 FILIP1Q7Z7B0 1213 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 NEK8Q86SG6 692 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 REXO1L1PQ8IX06 675 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 MSL3Q8N5Y2 521 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CCDC26Q8TAB7 109 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 RASGRP4Q8TDF6 673 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 MRPS27Q92552 414 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 DDX19AQ9NUU7 478 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CTDP1Q9Y5B0 961 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 SRPRBQ9Y5M8 271 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ZNF536O15090 1300 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ABCB7O75027 752 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CMA1P23946 247 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 OAS2P29728 719 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CLCN6P51797 869 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 PABPC4Q13310 644 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 ZRSR2Q15696 482 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 TKFCQ3LXA3 575 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 MOXD1Q6UVY6 613 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CCDC73Q6ZRK6 1079 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 FASTKD5Q7L8L6 764 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 C2orf69Q8N8R5 385 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CCDC97Q96F63 343 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CLMNQ96JQ2 1002 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 TRIM6Q9C030 488 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 GBA2Q9HCG7 927 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 NMRK2Q9NPI5 230 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 SPATS2LQ9NUQ6 558 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 HOXC10Q9NYD6 342 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 FBXO2Q9UK22 296 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 CCPG1Q9ULG6 757 aa8.08□□□□□ -1.12
SMARCE1-211ENST00000493660 TRAF5O00463 557 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 VWA5AO00534 786 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 MEIS2O14770 477 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 ABCD1P33897 745 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 PRPHP41219 470 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 USP11P51784 963 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 SNAP25P60880 206 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 TBC1D8BQ0IIM8 1120 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 RBBP5Q15291 538 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 TPD52L1Q16890 204 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 INF2Q27J81 1249 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 USH1GQ495M9 461 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 CCDC183Q5T5S1 534 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 CCDC174Q6PII3 467 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 LBX2Q6XYB7 198 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 MB21D1Q8N884 522 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 REPS2Q8NFH8 660 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 TBCKQ8TEA7 893 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 SLC10A4Q96EP9 437 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 OTUD5Q96G74 571 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 RABGAP1Q9Y3P9 1069 aa8.07□□□□□ -1.12
SMARCE1-211ENST00000493660 GCOM1H8Y6P7 765 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-211ENST00000493660 OPLAHO14841 1288 aa8.06□□□□□ -1.12
SMARCE1-211ENST00000493660 POLR2MP0CAP2 368 aa8.06□□□□□ -1.12
SMARCE1-211ENST00000493660 FAM160A1Q05DH4 1040 aa8.06□□□□□ -1.12
SMARCE1-211ENST00000493660 SNAPC2Q13487 334 aa8.06□□□□□ -1.12
SMARCE1-211ENST00000493660 DGKZQ13574 1117 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms