RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 MKL1Q969V6 931 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 CEP95Q96GE4 821 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 MRFAP1L1Q96HT8 127 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 TRIM5Q9C035 493 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 ZMYND12Q9H0C1 365 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 DBNDD1Q9H9R9 158 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 NYAP2Q9P242 653 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
PRPF3-206ENST00000493553 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
PRPF3-206ENST00000493553 SNED1Q8TER0 1413 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 F8W031 263 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-206ENST00000493553 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 CBFA2T2O43439 604 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 NRDCO43847 1150 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 ZNF500O60304 480 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-206ENST00000493553 SLFN14P0C7P3 912 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 POLD1P28340 1107 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 NAPAP54920 295 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 IQCB1Q15051 598 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 TMEM179Q6ZVK1 233 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 HEATR3Q7Z4Q2 680 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 METTL16Q86W50 562 aaKnown RBP11.36□□□□□ -0.59
PRPF3-206ENST00000493553 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 WHAMMQ8TF30 809 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 DCAF4Q8WV16 495 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 AK8Q96MA6 479 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 CUEDC2Q9H467 287 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 MAGEF1Q9HAY2 307 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 ZDHHC3Q9NYG2 299 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 PHF24Q9UPV7 400 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
PRPF3-206ENST00000493553 PNMA6FA0A0J9YX94 578 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 STXBP3O00186 592 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 PDHBP11177 359 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 CHRNA5P30532 468 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 ZNF75DP51815 510 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
PRPF3-206ENST00000493553 POSTNQ15063 836 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 NONOQ15233 471 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF3-206ENST00000493553 NT5DC1Q5TFE4 455 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 LUZP1Q86V48 1076 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-206ENST00000493553 SIX5Q8N196 739 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 SVOPQ8N4V2 548 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 RAB34Q9BZG1 259 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 PPP1R12CQ9BZL4 782 aa11.35□□□□□ -0.59
PRPF3-206ENST00000493553 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
PRPF3-206ENST00000493553 M0R2N6 131 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 SLC26A4O43511 780 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 VIL1P09327 827 aaKnown RBP11.34□□□□□ -0.59
PRPF3-206ENST00000493553 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 MX2P20592 715 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 SHMT1P34896 483 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 GSDMDP57764 484 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 ZNF543Q08ER8 600 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 NPY5RQ15761 445 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 AOC3Q16853 763 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-206ENST00000493553 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 TATDN1Q6P1N9 297 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 PIK3AP1Q6ZUJ8 805 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 PLA2G4DQ86XP0 818 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 DRC7Q8IY82 874 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 REXO1Q8N1G1 1221 aaKnown RBP11.34□□□□□ -0.59
PRPF3-206ENST00000493553 GSDMAQ96QA5 445 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
PRPF3-206ENST00000493553 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 IMPACTQ9P2X3 320 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 ZNRF3Q9ULT6 936 aa11.34□□□□□ -0.59
PRPF3-206ENST00000493553 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-206ENST00000493553 MPHOSPH10O00566 681 aaKnown RBP11.33□□□□□ -0.6
PRPF3-206ENST00000493553 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
PRPF3-206ENST00000493553 C21orf2O43822 256 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 ARHGEF15O94989 841 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 AKR1B1P15121 316 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 GCFC2P16383 781 aaKnown RBP11.33□□□□□ -0.6
PRPF3-206ENST00000493553 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-206ENST00000493553 ADCY7P51828 1080 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 MYL5Q02045 173 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 TNIP1Q15025 636 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 TEAD4Q15561 434 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 CFAP100Q494V2 611 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 LONRF3Q496Y0 759 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-206ENST00000493553 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 TNS4Q8IZW8 715 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms