RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
MSH6-208ENST00000493177 GJA9P57773 515 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 RESTQ13127 1097 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 PWP2Q15269 919 aaKnown RBP15.29■□□□□ 0.04
MSH6-208ENST00000493177 FOXD4L6Q3SYB3 417 aaPredicted RBP15.29■□□□□ 0.04
MSH6-208ENST00000493177 IQSEC1Q6DN90 963 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 FOXD4L3Q6VB84 417 aaPredicted RBP15.29■□□□□ 0.04
MSH6-208ENST00000493177 NOSTRINQ8IVI9 506 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 SAMD3Q8N6K7 520 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 KATNBL1Q9H079 304 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 ZSCAN16Q9H4T2 348 aaPredicted RBP15.29■□□□□ 0.04
MSH6-208ENST00000493177 PDGFCQ9NRA1 345 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 KIAA1217Q5T5P2 1943 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 A0A1W2PPC1 479 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 PIK3CDO00329 1044 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 ADCY6O43306 1168 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 ASGR1P07306 291 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 U2AF2P26368 475 aaKnown RBP eCLIP15.28■□□□□ 0.04
MSH6-208ENST00000493177 CST5P28325 142 aaPredicted RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 HSD17B4P51659 736 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 BEX3Q00994 111 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 NONOQ15233 471 aaKnown RBP eCLIP15.28■□□□□ 0.04
MSH6-208ENST00000493177 MCTP2Q6DN12 878 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 KLHDC9Q8NEP7 349 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 SYTL5Q8TDW5 730 aaPredicted RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 ANO3Q9BYT9 981 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 UPF3AQ9H1J1 476 aaKnown RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 EHMT1Q9H9B1 1298 aa15.28■□□□□ 0.04
MSH6-208ENST00000493177 MAP3K20Q9NYL2 800 aaKnown RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 NOL7Q9UMY1 257 aaKnown RBP15.28■□□□□ 0.04
MSH6-208ENST00000493177 MROH7Q68CQ1 1323 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 DCDC2CA8MYV0 355 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 M0R2N6 131 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 SLC34A2O95436 690 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 CLTBP09497 229 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 SMPD1P17405 629 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 ATP2B1P20020 1258 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 IRX5P78411 483 aaPredicted RBP15.27■□□□□ 0.04
MSH6-208ENST00000493177 TLE2Q04725 743 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 SNX17Q15036 470 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 ARHGEF16Q5VV41 709 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 TEX2Q8IWB9 1127 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 OR6J1Q8NGC5 347 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 TNFRSF25Q93038 417 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 GDF15Q99988 308 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 WDR11Q9BZH6 1224 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 PCDH10Q9P2E7 1040 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 ATP6V1DQ9Y5K8 247 aa15.27■□□□□ 0.04
MSH6-208ENST00000493177 A0A0U1RQG5 324 aaPredicted RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 TLR3O15455 904 aaKnown RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 BMP8BP34820 402 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.03
MSH6-208ENST00000493177 GHRHRQ02643 423 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 FSCN1Q16658 493 aaKnown RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 INF2Q27J81 1249 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 EARS2Q5JPH6 523 aaKnown RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 C1orf53Q5VUE5 145 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 TAPT1Q6NXT6 567 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 FAM173BQ6P4H8 233 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 NSUN6Q8TEA1 469 aaKnown RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 TBCKQ8TEA7 893 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 TAAR1Q96RJ0 339 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 MAF1Q9H063 256 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 COL20A1Q9P218 1284 aa15.26■□□□□ 0.03
MSH6-208ENST00000493177 GNEQ9Y223 722 aaKnown RBP15.26■□□□□ 0.03
MSH6-208ENST00000493177 MYH7BA7E2Y1 1941 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 ELP1O95163 1332 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 RAG1P15918 1043 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
MSH6-208ENST00000493177 DUSP28Q4G0W2 176 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 TDHQ8IZJ6 230 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 SCFD2Q8WU76 684 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 RMDN3Q96TC7 470 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 PDLIM7Q9NR12 457 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 TMEM39AQ9NV64 488 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 Q9Y3F1 56 aa15.25■□□□□ 0.03
MSH6-208ENST00000493177 NKRFO15226 690 aaKnown RBP eCLIP15.24■□□□□ 0.03
MSH6-208ENST00000493177 CABYRO75952 493 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 MYL3P08590 195 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 TXNP10599 105 aaKnown RBP15.24■□□□□ 0.03
MSH6-208ENST00000493177 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
MSH6-208ENST00000493177 ZNF76P36508 570 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 CPT1AP50416 773 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 TTLL4Q14679 1199 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 STXBP2Q15833 593 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 LETM2Q2VYF4 491 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 CXCL17Q6UXB2 119 aa15.24■□□□□ 0.03
MSH6-208ENST00000493177 SEPT14Q6ZU15 432 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms