RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
TPR-208ENST00000492973 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
TPR-208ENST00000492973 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
TPR-208ENST00000492973 H0YIN7 160 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 PDE8AO60658 829 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 NPR1P16066 1061 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 FOXO4P98177 505 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 APOBRQ0VD83 1088 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 STYK1Q6J9G0 422 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 NT5DC4Q86YG4 428 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 SLITRK4Q8IW52 837 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 TTLL11Q8NHH1 800 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 MASTLQ96GX5 879 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 HEXIM2Q96MH2 286 aaKnown RBP8.53□□□□□ -1.04
TPR-208ENST00000492973 MEIS3Q99687 375 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 BRMS1Q9HCU9 246 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 REV1Q9UBZ9 1251 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 U3KQE9 123 aa8.53□□□□□ -1.04
TPR-208ENST00000492973 CACNA1FO60840 1977 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 ATE1O95260 518 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 CSF1RP07333 972 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.05
TPR-208ENST00000492973 RBM25P49756 843 aaKnown RBP8.52□□□□□ -1.05
TPR-208ENST00000492973 CTSWP56202 376 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 C9orf131Q5VYM1 1079 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 ITPRIPQ8IWB1 547 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 ANKRD44Q8N8A2 993 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 ZNF622Q969S3 477 aaKnown RBP eCLIP8.52□□□□□ -1.052e-14■■■■□ 21.4
TPR-208ENST00000492973 MIPEPQ99797 713 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 DPH2Q9BQC3 489 aaPredicted RBP8.52□□□□□ -1.05
TPR-208ENST00000492973 ZFP64Q9NPA5 681 aa8.52□□□□□ -1.05
TPR-208ENST00000492973 ZC3H7BQ9UGR2 993 aaKnown RBP8.52□□□□□ -1.05
TPR-208ENST00000492973 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.05
TPR-208ENST00000492973 TNRC6CQ9HCJ0 1690 aaKnown RBP8.51□□□□□ -1.05
TPR-208ENST00000492973 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
TPR-208ENST00000492973 YBX3P16989 372 aaKnown RBP eCLIP8.51□□□□□ -1.05
TPR-208ENST00000492973 OXCT1P55809 520 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
TPR-208ENST00000492973 SEZ6Q53EL9 994 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 LMBR1LQ6UX01 489 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 ZNF654Q8IZM8 581 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 REXO1Q8N1G1 1221 aaKnown RBP8.51□□□□□ -1.05
TPR-208ENST00000492973 TTLL6Q8N841 843 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 FAM181AQ8N9Y4 354 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 RPGRQ92834 1020 aaKnown RBP8.51□□□□□ -1.05
TPR-208ENST00000492973 RBM17Q96I25 401 aaKnown RBP8.51□□□□□ -1.05
TPR-208ENST00000492973 CRAMP1Q96RY5 1269 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 GREM2Q9H772 168 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 EHMT1Q9H9B1 1298 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 MKNK2Q9HBH9 465 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 ZBTB40Q9NUA8 1239 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 PCMTD2Q9NV79 361 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 DDX19BQ9UMR2 479 aa8.51□□□□□ -1.05
TPR-208ENST00000492973 ANKRD36CQ5JPF3 1778 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 RTL9Q8NET4 1388 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 UPK3BL1B0FP48 263 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 UPK3BL2E5RIL1 263 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 DNAJA2O60884 412 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 GNAI3P08754 354 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 RAD51AP2Q09MP3 1159 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 GRAPQ13588 217 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 CCDC152Q4G0S7 254 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 DALRD3Q5D0E6 543 aaKnown RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 SLFN12Q8IYM2 578 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 ANKRD31Q8N7Z5 1873 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 RIN3Q8TB24 985 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 GRAPLQ8TC17 118 aaPredicted RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 CELF1Q92879 486 aaKnown RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 NKD1Q969G9 470 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 BICC1Q9H694 974 aaKnown RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 KIAA1551Q9HCM1 1747 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 GTF2IRD1Q9UHL9 959 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 PCDHB14Q9Y5E9 798 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
TPR-208ENST00000492973 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
TPR-208ENST00000492973 UTRNP46939 3433 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 LOC100996750A0A140TA64 210 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 PRNPP04156 253 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 OLFM4Q6UX06 510 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 FAM13CQ8NE31 585 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 KRTAP4-6Q9BYQ5 205 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
TPR-208ENST00000492973 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
TPR-208ENST00000492973 MAPK8IP1Q9UQF2 711 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.49□□□□□ -1.05
TPR-208ENST00000492973 COL4A1P02462 1669 aa8.49□□□□□ -1.05
TPR-208ENST00000492973 COL11A2P13942 1736 aaPredicted RBP8.49□□□□□ -1.05
TPR-208ENST00000492973 ADAMTS4O75173 837 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 BBOX1O75936 387 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 GNAI2P04899 355 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 ALDH1B1P30837 517 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 RFX5P48382 616 aaPredicted RBP8.48□□□□□ -1.05
TPR-208ENST00000492973 YARSP54577 528 aaKnown RBP8.48□□□□□ -1.05
TPR-208ENST00000492973 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
TPR-208ENST00000492973 CLCQ05315 142 aa8.48□□□□□ -1.05
TPR-208ENST00000492973 DNAJB8Q8NHS0 232 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms