RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 LAMC2Q13753 1193 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 CCSAPQ6IQ19 270 aaPredicted RBP15.94■□□□□ 0.14
CCM2-217ENST00000492883 DAGLBQ8NCG7 672 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 GPRASP2Q96D09 838 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 CDHR1Q96JP9 859 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 MXRA8Q9BRK3 442 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 JADE2Q9NQC1 790 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 PHF24Q9UPV7 400 aa15.94■□□□□ 0.14
CCM2-217ENST00000492883 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
CCM2-217ENST00000492883 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 MAFGO15525 162 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 GGPS1O95749 300 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 SP2Q02086 613 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 MTMR1Q13613 665 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 NEDD9Q14511 834 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 CEP55Q53EZ4 464 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 CELF3Q5SZQ8 465 aaKnown RBP15.93■□□□□ 0.14
CCM2-217ENST00000492883 AFG1LQ8WV93 481 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 GLT1D1Q96MS3 346 aa15.93■□□□□ 0.14
CCM2-217ENST00000492883 CCDC194A0A1B0GVG4 234 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 MYL3P08590 195 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 CYP3A4P08684 503 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
CCM2-217ENST00000492883 KRT2P35908 639 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 ARHGAP1Q07960 439 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 NPY5RQ15761 445 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 CXCL17Q6UXB2 119 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 SLC39A5Q6ZMH5 540 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 KRT25Q7Z3Z0 450 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 CYP2W1Q8TAV3 490 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 SPATA33Q96N06 139 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 SENP7Q9BQF6 1050 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 STARD7Q9NQZ5 370 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
CCM2-217ENST00000492883 A6NJR5 290 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 M0R2N6 131 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 EVI5O60447 810 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 KPNA6O60684 536 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 CABYRO75952 493 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 USP11P51784 963 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 GUCY1B3Q02153 619 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 SEMA3FQ13275 785 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 NONOQ15233 471 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCM2-217ENST00000492883 SAFBQ15424 915 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCM2-217ENST00000492883 MYSM1Q5VVJ2 828 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 KRT40Q6A162 431 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 CYFIP1Q7L576 1253 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 GIMAP8Q8ND71 665 aaPredicted RBP15.91■□□□□ 0.14
CCM2-217ENST00000492883 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 TBCKQ8TEA7 893 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 EMID1Q96A84 441 aaPredicted RBP15.91■□□□□ 0.14
CCM2-217ENST00000492883 KCNH7Q9NS40 1196 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 KIF3AQ9Y496 699 aa15.91■□□□□ 0.14
CCM2-217ENST00000492883 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.91■□□□□ 0.14
CCM2-217ENST00000492883 LCTP09848 1927 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 MYH6P13533 1939 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 FAM86B1E9PN63 330 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 MEIS1O00470 390 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 NOP56O00567 594 aaKnown RBP15.9■□□□□ 0.14
CCM2-217ENST00000492883 ATP9AO75110 1047 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 MMP1P03956 469 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 FAM86B2P0C5J1 330 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 ARP10275 920 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 LRRC26Q2I0M4 334 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 PLA2G4DQ86XP0 818 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 CRYGNQ8WXF5 182 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 ELP1O95163 1332 aa15.9■□□□□ 0.14
CCM2-217ENST00000492883 MMP3P08254 477 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 SP4Q02446 784 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 DGKDQ16760 1214 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 INF2Q27J81 1249 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 PRR16Q569H4 304 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 METTL7BQ6UX53 244 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 PIK3AP1Q6ZUJ8 805 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 NIPA1Q7RTP0 329 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 DIS3L2Q8IYB7 885 aaKnown RBP15.89■□□□□ 0.13
CCM2-217ENST00000492883 PPTC7Q8NI37 304 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 MTG1Q9BT17 334 aaPredicted RBP15.89■□□□□ 0.13
CCM2-217ENST00000492883 BCAS3Q9H6U6 928 aa15.89■□□□□ 0.13
CCM2-217ENST00000492883 AGO4Q9HCK5 861 aaKnown RBP15.89■□□□□ 0.13
CCM2-217ENST00000492883 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
CCM2-217ENST00000492883 A0A0U1RQG5 324 aaPredicted RBP15.88■□□□□ 0.13
CCM2-217ENST00000492883 BTBD18B2RXH4 712 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 PPFIA4O75335 1185 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 KCNA2P16389 499 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 CIITAP33076 1130 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 RTP1P59025 263 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 CHMP4BP1P59074 171 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 PSMC6P62333 389 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 PURAQ00577 322 aaKnown RBP15.88■□□□□ 0.13
CCM2-217ENST00000492883 SETQ01105 290 aaPredicted RBP15.88■□□□□ 0.13
CCM2-217ENST00000492883 NR5A1Q13285 461 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 HSDL1Q3SXM5 330 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 FBXO18Q8NFZ0 1043 aa15.88■□□□□ 0.13
CCM2-217ENST00000492883 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms