RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 DCDC2CA8MYV0 355 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 SPATA31C2B4DYI2 1134 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 MYL3P08590 195 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 CLTBP09497 229 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 SYN1P17600 705 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 CDK7P50613 346 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 NEK4P51957 841 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 NEDD9Q14511 834 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 SLC43A3Q8NBI5 491 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 GPRASP2Q96D09 838 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 ANO3Q9BYT9 981 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 C22orf23Q9BZE7 217 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
CDC42SE1-206ENST00000492796 TLR3O15455 904 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 MAFGO15525 162 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 GGPS1O95749 300 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 SREBF1P36956 1147 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 DGKDQ16760 1214 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 CELF3Q5SZQ8 465 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 REXO1Q8N1G1 1221 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 GIMAP8Q8ND71 665 aaPredicted RBP12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 ZFP91Q96JP5 570 aaPredicted RBP12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 SENP7Q9BQF6 1050 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
CDC42SE1-206ENST00000492796 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 KIAA0355O15063 1070 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 HOXD8P13378 290 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 BMP8BP34820 402 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 SP2Q02086 613 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 PTPN11Q06124 597 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 FAAP100Q0VG06 881 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 GTF3C6Q969F1 213 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 GDF15Q99988 308 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 KATNAL1Q9BW62 490 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 MLXIPQ9HAP2 919 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 VPS54Q9P1Q0 977 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
CDC42SE1-206ENST00000492796 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 DOCK5Q9H7D0 1870 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 PPFIA4O75335 1185 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 CD4P01730 458 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 XBP1P17861 261 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 ITGB5P18084 799 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 MAGEA10P43363 369 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 NLRP5P59047 1200 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 PSMC6P62333 389 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 MTMR1Q13613 665 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 ME3Q16798 604 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 HSDL1Q3SXM5 330 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 JAKMIP3Q5VZ66 844 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 GALNT17Q6IS24 598 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 WASF1Q92558 559 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 PGBD1Q96JS3 809 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 KIF2CQ99661 725 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 TMEM39AQ9NV64 488 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 TMEM260Q9NX78 707 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 TBX21Q9UL17 535 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 CEP290O15078 2479 aa12.17□□□□□ -0.46
CDC42SE1-206ENST00000492796 TRIM43BA6NCK2 446 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 F2P00734 622 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 CYP3A4P08684 503 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 KCNA2P16389 499 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 RABEP1Q15276 862 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 CEP55Q53EZ4 464 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 NIPA1Q7RTP0 329 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 DAGLBQ8NCG7 672 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 MXRA8Q9BRK3 442 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 PCDHA4Q9UN74 947 aa12.16□□□□□ -0.46
CDC42SE1-206ENST00000492796 B4GALT4O60513 344 aa12.15□□□□□ -0.46
CDC42SE1-206ENST00000492796 LARGE1O95461 756 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms