RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 GOLGA1Q92805 767 aa14.29□□□□□ -0.12
PRAME-213ENST00000492657 NAPGQ99747 312 aaPredicted RBP14.29□□□□□ -0.12
PRAME-213ENST00000492657 LACRTQ9GZZ8 138 aa14.29□□□□□ -0.12
PRAME-213ENST00000492657 HDAC6Q9UBN7 1215 aa14.29□□□□□ -0.12
PRAME-213ENST00000492657 MEA1Q16626 185 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 VWA3BQ502W6 1294 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 COBLL1Q53SF7 1204 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 CC2D1AQ6P1N0 951 aaPredicted RBP14.28□□□□□ -0.12
PRAME-213ENST00000492657 LRRC55Q6ZSA7 311 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 ERGIC2Q96RQ1 377 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
PRAME-213ENST00000492657 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 A0A1W2PRG0 241 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 YDJCA8MPS7 323 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 MED24O75448 989 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 ZBED6P86452 979 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 PRR16Q569H4 304 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 RABGGTAQ92696 567 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 MRIQ9BWK5 157 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 NDST4Q9H3R1 872 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 PANK4Q9NVE7 773 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 HOXA13P31271 388 aaPredicted RBP14.28□□□□□ -0.12
PRAME-213ENST00000492657 PPP1R2P41236 205 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 FLAD1Q8NFF5 587 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 MMRN2Q9H8L6 949 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
PRAME-213ENST00000492657 MEIS1O00470 390 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 TBC1D8O95759 1140 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 PLA2G4BP0C869 781 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 GCFC2P16383 781 aaKnown RBP14.27□□□□□ -0.12
PRAME-213ENST00000492657 ARHGAP4P98171 946 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 SLC30A10Q6XR72 485 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 NUP58Q9BVL2 599 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 ARFGAP3Q9NP61 516 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 KCNMB3Q9NPA1 279 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 SIK3Q9Y2K2 1263 aa14.27□□□□□ -0.12
PRAME-213ENST00000492657 POTEFA5A3E0 1075 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 ZNF263O14978 683 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 PSMC6P62333 389 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.13
PRAME-213ENST00000492657 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 POTEGQ6S5H5 508 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 KIAA1328Q86T90 577 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 GPBP1Q86WP2 473 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 C7orf43Q8WVR3 580 aa14.27□□□□□ -0.13
PRAME-213ENST00000492657 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.13
PRAME-213ENST00000492657 C10orf71Q711Q0 1435 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 ECE1P42892 770 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 AMPD2Q01433 879 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 FAM26FQ5R3K3 315 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 SMCR8Q8TEV9 937 aaPredicted RBP14.26□□□□□ -0.13
PRAME-213ENST00000492657 ZHX3Q9H4I2 956 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 ANKZF1Q9H8Y5 726 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 RSPH14Q9UHP6 348 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 CLRN2A0PK11 232 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 TRAF5O00463 557 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 C21orf2O43822 256 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 SRGAP2O75044 1071 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 LMAN1P49257 510 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 USP11P51784 963 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 KIAA1755Q5JYT7 1200 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 RETREG2Q8NC44 543 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 JAKMIP2Q96AA8 810 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 PNKPQ96T60 521 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 RHOXF2Q9BQY4 288 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 AMNQ9BXJ7 453 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
PRAME-213ENST00000492657 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.26□□□□□ -0.13
PRAME-213ENST00000492657 FAM86B1E9PN63 330 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 OPLAHO14841 1288 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 ATP1A1P05023 1023 aaKnown RBP14.25□□□□□ -0.13
PRAME-213ENST00000492657 FAM86B2P0C5J1 330 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 MAN2A1Q16706 1144 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 ARSHQ5FYA8 562 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
PRAME-213ENST00000492657 HYIQ5T013 277 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 SYDE2Q5VT97 1194 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 PLEKHA4Q9H4M7 779 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 HAUS4Q9H6D7 363 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 MYO6Q9UM54 1294 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 PPIP5K2O43314 1243 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 CYP11B2P19099 503 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms