RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
GPNMB-213ENST00000492512 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
GPNMB-213ENST00000492512 THPOP40225 353 aa16.03■□□□□ 0.16
GPNMB-213ENST00000492512 HTRA4P83105 476 aaPredicted RBP16.03■□□□□ 0.16
GPNMB-213ENST00000492512 EPC2Q52LR7 807 aa16.03■□□□□ 0.16
GPNMB-213ENST00000492512 BANK1Q8NDB2 785 aa16.03■□□□□ 0.16
GPNMB-213ENST00000492512 SP7Q8TDD2 431 aaPredicted RBP16.03■□□□□ 0.16
GPNMB-213ENST00000492512 C5orf42Q9H799 3197 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 RSPH10BP0C881 870 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 HSPD1P10809 573 aaKnown RBP16.02■□□□□ 0.16
GPNMB-213ENST00000492512 GPM6BQ13491 265 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 ADGRF4Q8IZF3 695 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 PABPC5Q96DU9 382 aaKnown RBP16.02■□□□□ 0.16
GPNMB-213ENST00000492512 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
GPNMB-213ENST00000492512 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
GPNMB-213ENST00000492512 MRPL11Q9Y3B7 192 aaKnown RBP16.02■□□□□ 0.16
GPNMB-213ENST00000492512 ZNF318Q5VUA4 2279 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 A0A0D9SFI3 127 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 H3BNC9 293 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 DHX16O60231 1041 aaKnown RBP16.01■□□□□ 0.15
GPNMB-213ENST00000492512 PPFIA4O75335 1185 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 NR3C2P08235 984 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 NHLH1Q02575 133 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
GPNMB-213ENST00000492512 PLEKHG4Q58EX7 1191 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 TCEAL5Q5H9L2 206 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 SERINC5Q86VE9 423 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 FBXO11Q86XK2 927 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 PNMA1Q8ND90 353 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 ESR2Q92731 530 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 KCNH6Q9H252 994 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 RNF41Q9H4P4 317 aaPredicted RBP16.01■□□□□ 0.15
GPNMB-213ENST00000492512 PXMP2Q9NR77 195 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 PRKAG3Q9UGI9 489 aa16.01■□□□□ 0.15
GPNMB-213ENST00000492512 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 RALGAPA2Q2PPJ7 1873 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 POTEB3A0JP26 581 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 UPP2O95045 317 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 CFBP00751 764 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 HOXD8P13378 290 aaPredicted RBP16■□□□□ 0.15
GPNMB-213ENST00000492512 ZP2Q05996 745 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 HIC1Q14526 733 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 MYSM1Q5VVJ2 828 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 POTEBQ6S5H4 581 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 DGKHQ86XP1 1220 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 TBC1D10CQ8IV04 446 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 TMEM192Q8IY95 271 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 FBXL18Q96ME1 805 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 SPATA33Q96N06 139 aa16■□□□□ 0.15
GPNMB-213ENST00000492512 NSUN3Q9H649 340 aaKnown RBP16■□□□□ 0.15
GPNMB-213ENST00000492512 SORBS3O60504 671 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 MYCLP12524 364 aaPredicted RBP15.99■□□□□ 0.15
GPNMB-213ENST00000492512 HSDL1Q3SXM5 330 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 CCDC178Q5BJE1 867 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 KCNV1Q6PIU1 500 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 ZNF589Q86UQ0 364 aaPredicted RBP15.99■□□□□ 0.15
GPNMB-213ENST00000492512 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 SEPT8Q92599 483 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 ATP6V0A1Q93050 837 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 UPF3BQ9BZI7 483 aaKnown RBP15.99■□□□□ 0.15
GPNMB-213ENST00000492512 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 CLDND1Q9NY35 253 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
GPNMB-213ENST00000492512 NEDD4P46934 1319 aa15.98■□□□□ 0.15
GPNMB-213ENST00000492512 C17orf102A2RUQ5 167 aa15.98■□□□□ 0.15
GPNMB-213ENST00000492512 GGPS1O95749 300 aa15.98■□□□□ 0.15
GPNMB-213ENST00000492512 CELF3Q5SZQ8 465 aaKnown RBP15.98■□□□□ 0.15
GPNMB-213ENST00000492512 ADHFE1Q8IWW8 467 aa15.98■□□□□ 0.15
GPNMB-213ENST00000492512 CCDC171Q6TFL3 1326 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 C19orf67A6NJJ6 358 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 NCK2O43639 380 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 CTSHP09668 335 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
GPNMB-213ENST00000492512 COL19A1Q14993 1142 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 PDCD2LQ9BRP1 358 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 C16orf70Q9BSU1 422 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 IFIH1Q9BYX4 1025 aaKnown RBP15.97■□□□□ 0.15
GPNMB-213ENST00000492512 JMJD4Q9H9V9 463 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 COL4A6Q14031 1691 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 ATG2AQ2TAZ0 1938 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 KAT6AQ92794 2004 aa15.97■□□□□ 0.15
GPNMB-213ENST00000492512 H3BRB1 525 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 ZNF213O14771 459 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 KDM4AO75164 1064 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 RGS20O76081 388 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 PARP1P09874 1014 aaKnown RBP15.96■□□□□ 0.15
GPNMB-213ENST00000492512 IRS1P35568 1242 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 HSD17B4P51659 736 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 PDE1AP54750 535 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms