RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ICAM4Q14773 271 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 NFE2L2Q16236 605 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 MCTP2Q6DN12 878 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 NOP9Q86U38 636 aaKnown RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 LINC00482Q8N8I6 264 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 NLGN2Q8NFZ4 835 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 DDX11Q96FC9 970 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 LCORQ96JN0 433 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 MRGPRX3Q96LB0 322 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 RNPC3Q96LT9 517 aaKnown RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 RXFP1Q9HBX9 757 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 JADE2Q9NQC1 790 aa4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 ING1Q9UK53 422 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P30-201ENST00000492455 ANKRD34BA5PLL1 514 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 TGM1P22735 817 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 THBS2P35442 1172 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 CYP4F3Q08477 520 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 NOL9Q5SY16 702 aaKnown RBP4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 HEATR6Q6AI08 1181 aaKnown RBP4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 EEPD1Q7L9B9 569 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF227Q86WZ6 799 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 ARHGEF39Q8N4T4 335 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 LZTR1Q8N653 840 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 TTLL6Q8N841 843 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 NETO2Q8NC67 525 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 BRF1Q92994 677 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 ZNF669Q96BR6 464 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 PTCHD1Q96NR3 888 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 EPN3Q9H201 632 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 WHRNQ9P202 907 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 PFDN2Q9UHV9 154 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 FHOD1Q9Y613 1164 aa4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 MRPL42Q9Y6G3 142 aaKnown RBP4.41□□□□□ -1.7
HMGB1P30-201ENST00000492455 A0A1W2PQU0 124 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 ITGAVP06756 1048 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 GRIA2P42262 883 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 SQSTM1Q13501 440 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 MTERF2Q49AM1 385 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 FOXB2Q5VYV0 432 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 KYQ8NBH2 561 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 TXNDC5Q8NBS9 432 aaKnown RBP4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 ADCY4Q8NFM4 1077 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 MRFAP1L1Q96HT8 127 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 RCC1LQ96I51 464 aaKnown RBP4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 MCMBPQ9BTE3 642 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 ARHGEF4Q9NR80 690 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPP4R1LQ9P1A2 415 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 CGGBP1Q9UFW8 167 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 EMC9Q9Y3B6 208 aa4.4□□□□□ -1.71
HMGB1P30-201ENST00000492455 A0A087WZG4 1122 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 H0Y8X5 98 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPFIA2O75334 1257 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 CYP1A1P04798 512 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 FAM153BP0C7A2 387 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 ITGA4P13612 1032 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 C2orf27AQ580R0 203 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 TRIM59Q8IWR1 403 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 FIBCD1Q8N539 461 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 SH3TC2Q8TF17 1288 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 APBA2Q99767 749 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 GORASP1Q9BQQ3 440 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 C11orf84Q9BUA3 381 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 SPATA9Q9BWV2 254 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 NOL6Q9H6R4 1146 aaKnown RBP4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 CD248Q9HCU0 757 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 CADPSQ9ULU8 1353 aa4.39□□□□□ -1.71
HMGB1P30-201ENST00000492455 TLDC2A0PJX2 215 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPP2R2AP63151 447 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 SSRP1Q08945 709 aaKnown RBP4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 ABHD18Q0P651 414 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 SF1Q15637 639 aaKnown RBP4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 SV2CQ496J9 727 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 SPDYAQ5MJ70 313 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 YOD1Q5VVQ6 348 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 ETV3LQ6ZN32 361 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 ZC3H18Q86VM9 953 aaKnown RBP4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 ZNF575Q86XF7 245 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 BVESQ8NE79 360 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 USP33Q8TEY7 942 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 SGSM3Q96HU1 749 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 GBP3Q9H0R5 595 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 SF3B6Q9Y3B4 125 aaKnown RBP4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 KDM2BQ8NHM5 1336 aa4.38□□□□□ -1.71
HMGB1P30-201ENST00000492455 DDX3XO00571 662 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 VAMP4O75379 141 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPM1BO75688 479 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 C8BP07358 591 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 CD3EP07766 207 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 POU4F1Q01851 419 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 IFRD2Q12894 506 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPP2R5DQ14738 602 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 TCEAL1Q15170 157 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 HS1BP3Q53T59 392 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 PRAMEF18Q5VWM3 479 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 ARHGEF18Q6ZSZ5 1173 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 ADAT2Q7Z6V5 191 aaKnown RBP4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 ZBTB38Q8NAP3 1195 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 IGDCC4Q8TDY8 1250 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 BTN2A2Q8WVV5 523 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms