RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 GGPS1O95749 300 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 TGFB3P10600 412 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 HOXD8P13378 290 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 UBA1P22314 1058 aaKnown RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 ICAM3P32942 547 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 PSEN2P49810 448 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 ZNF200P98182 395 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 GPNMBQ14956 572 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 DGKDQ16760 1214 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 RTN1Q16799 776 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 WWC2Q6AWC2 1192 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 GDF6Q6KF10 455 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 GUCD1Q96NT3 240 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 INPP4AQ96PE3 977 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 ALG1Q9BT22 464 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 TTYH1Q9H313 450 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 HDAC6Q9UBN7 1215 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 SEC63Q9UGP8 760 aaKnown RBP10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 FRMPD4Q14CM0 1322 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
COL6A4P1-203ENST00000491915 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PPFIA3O75145 1194 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 FGBP02675 491 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 HMGB1P09429 215 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 SUPT20HL2P0C7V6 817 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 ZNF286BP0CG31 522 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 RPS6KB1P23443 525 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PBX2P40425 430 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 SMAD3P84022 425 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PTGISQ16647 500 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 KCNV1Q6PIU1 500 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 HEATR3Q7Z4Q2 680 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PPTC7Q8NI37 304 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 HERVK_113Q902F9 699 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 BRF1Q92994 677 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 CUL5Q93034 780 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 SPATA33Q96N06 139 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 C16orf70Q9BSU1 422 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 MLXIPQ9HAP2 919 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 RBM28Q9NW13 759 aaKnown RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 NAP1L2Q9ULW6 460 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PCDHA6Q9UN73 950 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 PCDHA8Q9Y5H6 950 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 MYO9BQ13459 2157 aa10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 TRIP12Q14669 1992 aaPredicted RBP10.25□□□□□ -0.77
COL6A4P1-203ENST00000491915 GOLGA8AA7E2F4 631 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 GOLGA8BA8MQT2 603 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 STXBP3O00186 592 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 IQCF3P0C7M6 154 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 ITGB5P18084 799 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 MFSD10Q14728 455 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 PKN1Q16512 942 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 KIAA0753Q2KHM9 967 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 BLOC1S2Q6QNY1 142 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 DEFB128Q7Z7B8 93 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 SESTD1Q86VW0 696 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 FBXL16Q8N461 479 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 CYP2W1Q8TAV3 490 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 WNT8BQ93098 351 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 PGBD1Q96JS3 809 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 AGXT2Q9BYV1 514 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 TMEM260Q9NX78 707 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 UBIAD1Q9Y5Z9 338 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 TET1Q8NFU7 2136 aa10.24□□□□□ -0.77
COL6A4P1-203ENST00000491915 SMCO2A6NFE2 343 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 STAM2O75886 525 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 REC8O95072 547 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 PDIA3P30101 505 aaKnown RBP10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 CCT2P78371 535 aaKnown RBP10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 FGD1P98174 961 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 TOB2Q14106 344 aaPredicted RBP10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 NTRK3Q16288 839 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 RPUSD2Q8IZ73 545 aaKnown RBP10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 GPR20Q99678 358 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 RIC8AQ9NPQ8 531 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 GTF2IRD1Q9UHL9 959 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
COL6A4P1-203ENST00000491915 GSTTP1A0A1W2PQM5 241 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 H3BRB1 525 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 FIBPO43427 364 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 F2P00734 622 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 LGALS2P05162 132 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 ARP10275 920 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 KCNA2P16389 499 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 METAP2P50579 478 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 NAPAP54920 295 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 EVCP57679 992 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 NEDD9Q14511 834 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
COL6A4P1-203ENST00000491915 TCTN1Q2MV58 587 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms