RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 MS4A1P11836 297 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 PPARAQ07869 468 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 MFSD10Q14728 455 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 KIAA0753Q2KHM9 967 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 FBXL6Q8N531 539 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 TOP1MTQ969P6 601 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 ALG13Q9NP73 1137 aaKnown RBP16.32■□□□□ 0.2
ATG4B-222ENST00000491867 NCOR2Q9Y618 2525 aa16.32■□□□□ 0.2
ATG4B-222ENST00000491867 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-222ENST00000491867 RSPH10B2B2RC85 870 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 TBX10O75333 385 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 RSPH10BP0C881 870 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 ZNF286BP0CG31 522 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 CTNNB1P35222 781 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.22e-8■■■■■ 34.1
ATG4B-222ENST00000491867 THPOP40225 353 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 ZXDAP98168 799 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 PLEKHG4Q58EX7 1191 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 ATOH1Q92858 354 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-222ENST00000491867 KATNAL1Q9BW62 490 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 IGFLR1Q9H665 355 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 CD207Q9UJ71 328 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 CACNA1GO43497 2377 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 DMDP11532 3685 aa16.31■□□□□ 0.2
ATG4B-222ENST00000491867 GRM6O15303 877 aa16.3■□□□□ 0.2
ATG4B-222ENST00000491867 LINC01565O15544 149 aa16.3■□□□□ 0.2
ATG4B-222ENST00000491867 ZFYP08048 801 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-222ENST00000491867 HIC1Q14526 733 aa16.3■□□□□ 0.2
ATG4B-222ENST00000491867 IFIH1Q9BYX4 1025 aaKnown RBP16.3■□□□□ 0.2
ATG4B-222ENST00000491867 NAPBQ9H115 298 aa16.3■□□□□ 0.2
ATG4B-222ENST00000491867 ZBTB40Q9NUA8 1239 aa16.3■□□□□ 0.2
ATG4B-222ENST00000491867 DDX19BQ9UMR2 479 aa16.3■□□□□ 0.2
ATG4B-222ENST00000491867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
ATG4B-222ENST00000491867 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 HAS3O00219 553 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-222ENST00000491867 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
ATG4B-222ENST00000491867 CSPG5O95196 566 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 F2P00734 622 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
ATG4B-222ENST00000491867 DIEXFQ68CQ4 756 aaKnown RBP16.29■□□□□ 0.2
ATG4B-222ENST00000491867 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
ATG4B-222ENST00000491867 SEPT8Q92599 483 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
ATG4B-222ENST00000491867 ATG2AQ2TAZ0 1938 aa16.28■□□□□ 0.2
ATG4B-222ENST00000491867 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-222ENST00000491867 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
ATG4B-222ENST00000491867 FIBCD1Q8N539 461 aa16.28■□□□□ 0.2
ATG4B-222ENST00000491867 C11orf84Q9BUA3 381 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-222ENST00000491867 LMAN2LQ9H0V9 348 aa16.28■□□□□ 0.2
ATG4B-222ENST00000491867 IRF2BPLQ9H1B7 796 aa16.28■□□□□ 0.2
ATG4B-222ENST00000491867 KMT2EQ8IZD2 1858 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 LOC730098B7Z3J9 87 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 C5orf67F2Z3F1 127 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 RB1P06400 928 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 BMPR1AP36894 532 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 NOVP48745 357 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 ADAM15Q13444 863 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 USH1GQ495M9 461 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-222ENST00000491867 IL17RAQ96F46 866 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.2
ATG4B-222ENST00000491867 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
ATG4B-222ENST00000491867 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
ATG4B-222ENST00000491867 COL4A6Q14031 1691 aa16.27■□□□□ 0.19
ATG4B-222ENST00000491867 EYA4O95677 639 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 AVPR2P30518 371 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 NDUFV1P49821 464 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 SIGLEC14Q08ET2 396 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 LAMC2Q13753 1193 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 STXBP2Q15833 593 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 TSHZ3Q63HK5 1081 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 RGS22Q8NE09 1264 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 NSUN6Q8TEA1 469 aaKnown RBP16.26■□□□□ 0.19
ATG4B-222ENST00000491867 TBC1D5Q92609 795 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 MSLNLQ96KJ4 702 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 TAAR1Q96RJ0 339 aa16.26■□□□□ 0.19
ATG4B-222ENST00000491867 DMXL1Q9Y485 3027 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 RALGAPA2Q2PPJ7 1873 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 H0Y858 1186 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 CTSHP09668 335 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 LINC00271P0C7V0 271 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
ATG4B-222ENST00000491867 CBX2Q14781 532 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-222ENST00000491867 ASCL5Q7RTU5 278 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-222ENST00000491867 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 TMEM47Q9BQJ4 181 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 TLR9Q9NR96 1032 aa16.25■□□□□ 0.19
ATG4B-222ENST00000491867 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-222ENST00000491867 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
ATG4B-222ENST00000491867 SMRP1Q8NCR6 262 aa16.24■□□□□ 0.19
ATG4B-222ENST00000491867 ASIC4Q96FT7 647 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms