RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 USP38Q8NB14 1042 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 SCLYQ96I15 445 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 TAAR1Q96RJ0 339 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 SEC63Q9UGP8 760 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 CHD7Q9P2D1 2997 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 SCN10AQ9Y5Y9 1956 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 OPLAHO14841 1288 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 SUPT20HL2P0C7V6 817 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 TXNP10599 105 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 MCM2P49736 904 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 CCT2P78371 535 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 GHRHRQ02643 423 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 SCRN1Q12765 414 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 TTLL4Q14679 1199 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 ME3Q16798 604 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 NBPF20Q3BBV1 942 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 OTOP2Q7RTS6 562 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 LARP6Q9BRS8 491 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 RNF26Q9BY78 433 aaPredicted RBP17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 NCOA5Q9HCD5 579 aaKnown RBP17.28■□□□□ 0.36
CDC42SE1-205ENST00000491825 B4DLN1 442 aa17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 hCG_1984214I3L0E3 225 aa17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 LARGE1O95461 756 aa17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 RAB30Q15771 203 aa17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 CPLX2Q6PUV4 134 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 NSUN6Q8TEA1 469 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 PPP1R13LQ8WUF5 828 aa17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 MTIF3Q9H2K0 278 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 YBX2Q9Y2T7 364 aaKnown RBP17.27■□□□□ 0.36
CDC42SE1-205ENST00000491825 CPLX1O14810 134 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 KPNA6O60684 536 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 CDKL5O76039 1030 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 STK3Q13188 491 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 MCF2L2Q86YR7 1114 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 RMDN3Q96TC7 470 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 MRPL11Q9Y3B7 192 aaKnown RBP17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 PCDHA1Q9Y5I3 950 aa17.26■□□□□ 0.35
CDC42SE1-205ENST00000491825 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 PFKMP08237 780 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 MMP3P08254 477 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 HSD17B4P51659 736 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 PTPN11Q06124 597 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 TEX2Q8IWB9 1127 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 RPUSD2Q8IZ73 545 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 AFG1LQ8WV93 481 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 NKX2-4Q9H2Z4 354 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
CDC42SE1-205ENST00000491825 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 GH1P01241 217 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 ST3GAL1Q11201 340 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 ADGRE1Q14246 886 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 STXBP2Q15833 593 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 PFKFB3Q16875 520 aaPredicted RBP17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 FAM47CQ5HY64 1035 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 TRIM22Q8IYM9 498 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 KAT2BQ92831 832 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 PHKBQ93100 1093 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 PXMP2Q9NR77 195 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 MSRAQ9UJ68 235 aa17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 V9GY48 417 aaPredicted RBP17.24■□□□□ 0.35
CDC42SE1-205ENST00000491825 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 SCG2P13521 617 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 EIF2AK2P19525 551 aaKnown RBP17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 PKN1Q16512 942 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 PIBF1Q8WXW3 757 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 EMID1Q96A84 441 aaPredicted RBP17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 SLC4A7Q9Y6M7 1214 aa17.23■□□□□ 0.35
CDC42SE1-205ENST00000491825 hCG_1642624A0A1W2PR95 340 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 RGS20O76081 388 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 DEXIO95424 95 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 CFBP00751 764 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 NR3C2P08235 984 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 IQCF3P0C7M6 154 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 RFC2P35250 354 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms