RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TRPV6Q9H1D0 765 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 CYP46A1Q9Y6A2 500 aa17.48■□□□□ 0.39
COL27A1-206ENST00000490831 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
COL27A1-206ENST00000490831 FIBPO43427 364 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 PPFIA4O75335 1185 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 GGPS1O95749 300 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 SUPT20HL2P0C7V6 817 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 PDIA3P30101 505 aaKnown RBP17.47■□□□□ 0.39
COL27A1-206ENST00000490831 NTRK3Q16288 839 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 UBE2SQ16763 222 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 PFKFB3Q16875 520 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-206ENST00000490831 C9orf50Q5SZB4 431 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 IL17RAQ96F46 866 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-206ENST00000490831 SENP7Q9BQF6 1050 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
COL27A1-206ENST00000490831 NAP1L2Q9ULW6 460 aaPredicted RBP17.47■□□□□ 0.39
COL27A1-206ENST00000490831 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
COL27A1-206ENST00000490831 HAS3O00219 553 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 PRPF3O43395 683 aaKnown RBP17.46■□□□□ 0.39
COL27A1-206ENST00000490831 F2P00734 622 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 NAPAP54920 295 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 PPIGQ13427 754 aaKnown RBP eCLIP17.46■□□□□ 0.395e-24■□□□□ 10.2
COL27A1-206ENST00000490831 NEDD9Q14511 834 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 HSDL1Q3SXM5 330 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 TMEM199Q8N511 208 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 SPATA33Q96N06 139 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 GLT8D2Q9H1C3 349 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 HIPK3Q9H422 1215 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
COL27A1-206ENST00000490831 PCDHA6Q9UN73 950 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 PCDHA8Q9Y5H6 950 aa17.46■□□□□ 0.39
COL27A1-206ENST00000490831 ESYT2A0FGR8 921 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 SCG2P13521 617 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 IFNAR1P17181 557 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 CLK2P49760 499 aaKnown RBP17.45■□□□□ 0.38
COL27A1-206ENST00000490831 ANAPC15P60006 121 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 PKN1Q16512 942 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 NLRX1Q86UT6 975 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 GPRASP2Q96D09 838 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 ZNF274Q96GC6 653 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-206ENST00000490831 KATNAL1Q9BW62 490 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 RTEL1Q9NZ71 1219 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 UBIAD1Q9Y5Z9 338 aa17.45■□□□□ 0.38
COL27A1-206ENST00000490831 SMCO2A6NFE2 343 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
COL27A1-206ENST00000490831 FOSP01100 380 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-206ENST00000490831 CSF2RAP15509 400 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 ITGB5P18084 799 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 CYP2C18P33260 490 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 ADCY7P51828 1080 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 METTL7BQ6UX53 244 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 C16orf59Q7L2K0 433 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 CDHR1Q96JP9 859 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-206ENST00000490831 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
COL27A1-206ENST00000490831 WNT8AQ9H1J5 351 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 BCAS3Q9H6U6 928 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 EHMT1Q9H9B1 1298 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
COL27A1-206ENST00000490831 MAFGO15525 162 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 PSEN2P49810 448 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 AP3B2Q13367 1082 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 CTAGE1Q96RT6 745 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 C16orf70Q9BSU1 422 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 ZMYND12Q9H0C1 365 aa17.43■□□□□ 0.38
COL27A1-206ENST00000490831 PITPNM1O00562 1244 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 ZNF286BP0CG31 522 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 CYP2C9P11712 490 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 MFSD10Q14728 455 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 TMEM240Q5SV17 173 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 RASIP1Q5U651 963 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 CYFIP1Q7L576 1253 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 GIMAP8Q8ND71 665 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-206ENST00000490831 CCDC12Q8WUD4 166 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-206ENST00000490831 PHKBQ93100 1093 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 GPR20Q99678 358 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL27A1-206ENST00000490831 ANO3Q9BYT9 981 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 NCOA5Q9HCD5 579 aaKnown RBP17.42■□□□□ 0.38
COL27A1-206ENST00000490831 IL23AQ9NPF7 189 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 JADE2Q9NQC1 790 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
COL27A1-206ENST00000490831 KCNA2P16389 499 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 SREBF1P36956 1147 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 SMAD3P84022 425 aaKnown RBP17.41■□□□□ 0.38
COL27A1-206ENST00000490831 RBL2Q08999 1139 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 MCTP2Q6DN12 878 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 FAM109BQ6ICB4 259 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-206ENST00000490831 GDF6Q6KF10 455 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-206ENST00000490831 PSRC1Q6PGN9 363 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-206ENST00000490831 PPP1R13LQ8WUF5 828 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 CRYGNQ8WXF5 182 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms