RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ERVK-24P63145 666 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 GRIN1Q05586 938 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 PNOCQ13519 176 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 TKFCQ3LXA3 575 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 USH1GQ495M9 461 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 KRT79Q5XKE5 535 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 CABP7Q86V35 215 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 LUZP1Q86V48 1076 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 NUP88Q99567 741 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 TRIM5Q9C035 493 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 NT5C3AQ9H0P0 336 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 MROH8Q9H579 483 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 TMEM260Q9NX78 707 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 LRWD1Q9UFC0 647 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 FBXO40Q9UH90 709 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 KIAA0100Q14667 2235 aaKnown RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 HTTP42858 3142 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 BIN1O00499 593 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 VWA5AO00534 786 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 CYP3A7P24462 503 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 MSNP26038 577 aaKnown RBP11.53□□□□□ -0.56
HDAC3-210ENST00000490808 ZNF76P36508 570 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 TXKP42681 527 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
HDAC3-210ENST00000490808 IQCB1Q15051 598 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 UBE2SQ16763 222 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 SARM1Q6SZW1 724 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 TRMT44Q8IYL2 757 aaKnown RBP11.53□□□□□ -0.56
HDAC3-210ENST00000490808 ABRAQ8N0Z2 381 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 ANKRD13CQ8N6S4 541 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 SOCS4Q8WXH5 440 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 PAGE5Q96GU1 130 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 PCDHA12Q9UN75 941 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 ZNF236Q9UL36 1845 aa11.53□□□□□ -0.56
HDAC3-210ENST00000490808 CENPFP49454 3210 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 WNT7AO00755 349 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 MEIS2O14770 477 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 ICAM1P05362 532 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 CYP3A4P08684 503 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 CAPN2P17655 700 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 ERCC5P28715 1186 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-210ENST00000490808 CDC25BP30305 580 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 TECP42680 631 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 AFMP43652 599 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 ARHGAP4P98171 946 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 MYL5Q02045 173 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 STIM1Q13586 685 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-210ENST00000490808 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 RIOX2Q8IUF8 465 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 DRC7Q8IY82 874 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 AOPEPQ8N6M6 819 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 IGSF22Q8N9C0 903 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 SLC5A4Q9NY91 659 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 CPA4Q9UI42 421 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
HDAC3-210ENST00000490808 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
HDAC3-210ENST00000490808 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 TNPO2O14787 897 aaKnown RBP11.51□□□□□ -0.57
HDAC3-210ENST00000490808 SREBF1P36956 1147 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 STAT3P40763 770 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 PSMC4P43686 418 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 DPYDQ12882 1025 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 IRF5Q13568 498 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 MORC3Q14149 939 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 Q4G0T1 1027 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 HAUS3Q68CZ6 603 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 USP17L6PQ6QN14 398 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 TTC12Q9H892 705 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-210ENST00000490808 MAN1B1Q9UKM7 699 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 CCPG1Q9ULG6 757 aa11.51□□□□□ -0.57
HDAC3-210ENST00000490808 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-210ENST00000490808 ADAMTS3O15072 1205 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 NRDCO43847 1150 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 CFBP00751 764 aa11.5□□□□□ -0.57
HDAC3-210ENST00000490808 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms