RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 MB21D2Q8IYB1 491 aaPredicted RBP22.79■■□□□ 1.24
SREBF1-216ENST00000490796 MICALL1Q8N3F8 863 aa22.79■■□□□ 1.24
SREBF1-216ENST00000490796 IL31RAQ8NI17 732 aa22.79■■□□□ 1.24
SREBF1-216ENST00000490796 IGDCC4Q8TDY8 1250 aa22.79■■□□□ 1.24
SREBF1-216ENST00000490796 CUL5Q93034 780 aa22.79■■□□□ 1.24
SREBF1-216ENST00000490796 RRP36Q96EU6 259 aaKnown RBP22.79■■□□□ 1.24
SREBF1-216ENST00000490796 RGS20O76081 388 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 DDAH1O94760 285 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 CA3P07451 260 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 VCANP13611 3396 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 PTK7Q13308 1070 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 SLC35G1Q2M3R5 365 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 ZNF654Q8IZM8 581 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 SMARCC2Q8TAQ2 1214 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 GBF1Q92538 1859 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 ZFP91Q96JP5 570 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-216ENST00000490796 THEGQ9P2T0 379 aa22.78■■□□□ 1.24
SREBF1-216ENST00000490796 TRIP12Q14669 1992 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-216ENST00000490796 CCDC69A6NI79 296 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 NOP56O00567 594 aaKnown RBP22.77■■□□□ 1.24
SREBF1-216ENST00000490796 PRC1O43663 620 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 CKBP12277 381 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 UBA1P22314 1058 aaKnown RBP22.77■■□□□ 1.24
SREBF1-216ENST00000490796 MCM5P33992 734 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 GNAQP50148 359 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 ANTXR2P58335 489 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 HSDL1Q3SXM5 330 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 HERC6Q8IVU3 1022 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 TMTC2Q8N394 836 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 IL27Q8NEV9 243 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 MAP3K14Q99558 947 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 LZTS2Q9BRK4 669 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 ZBED2Q9BTP6 218 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 PRDM6Q9NQX0 595 aa22.77■■□□□ 1.24
SREBF1-216ENST00000490796 MYH7BA7E2Y1 1941 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 HAS3O00219 553 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 GTPBP6O43824 516 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-216ENST00000490796 TLL1O43897 1013 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 STAM2O75886 525 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 CNKSR3Q6P9H4 555 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 ATXN2LQ8WWM7 1075 aaKnown RBP22.76■■□□□ 1.23
SREBF1-216ENST00000490796 MTA3Q9BTC8 594 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 MYL10Q9BUA6 226 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 LY9Q9HBG7 655 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 CHD9Q3L8U1 2897 aa22.76■■□□□ 1.23
SREBF1-216ENST00000490796 TANC1Q9C0D5 1861 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 HOXD8P13378 290 aaPredicted RBP22.75■■□□□ 1.23
SREBF1-216ENST00000490796 SP2Q02086 613 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 RBL2Q08999 1139 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 NEDD9Q14511 834 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 DHX38Q92620 1227 aaKnown RBP22.75■■□□□ 1.23
SREBF1-216ENST00000490796 TMEM87BQ96K49 555 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 CTAGE1Q96RT6 745 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 SPZ1Q9BXG8 430 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 CERS4Q9HA82 394 aa22.75■■□□□ 1.23
SREBF1-216ENST00000490796 SKIV2LQ15477 1246 aaKnown RBP22.74■■□□□ 1.23
SREBF1-216ENST00000490796 TET1Q8NFU7 2136 aa22.74■■□□□ 1.23
SREBF1-216ENST00000490796 RTEL1Q9NZ71 1219 aa22.74■■□□□ 1.23
SREBF1-216ENST00000490796 C17orf102A2RUQ5 167 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 EFCAB14O75071 495 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 CALM1P0DP23 149 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 CALM2P0DP24 149 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 CALM3P0DP25 149 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 SMARCA1P28370 1054 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 WDR5P61964 334 aaKnown RBP22.73■■□□□ 1.23
SREBF1-216ENST00000490796 MRPS5P82675 430 aaKnown RBP22.73■■□□□ 1.23
SREBF1-216ENST00000490796 ZNF200P98182 395 aaPredicted RBP22.73■■□□□ 1.23
SREBF1-216ENST00000490796 ARNTL2Q8WYA1 636 aa22.73■■□□□ 1.23
SREBF1-216ENST00000490796 GPKOWQ92917 476 aaPredicted RBP eCLIP22.73■■□□□ 1.235e-7■■■■□ 23.9
SREBF1-216ENST00000490796 ABHD14A-ACY1A0A1B0GW23 586 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 H3BRB1 525 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 FIBPO43427 364 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 IKBKEQ14164 716 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 ZNF618Q5T7W0 954 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 CYFIP1Q7L576 1253 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 ATP6V0A1Q93050 837 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 INPP4AQ96PE3 977 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-216ENST00000490796 ESYT1Q9BSJ8 1104 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 USP26Q9BXU7 913 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 LSG1Q9H089 658 aaKnown RBP22.72■■□□□ 1.23
SREBF1-216ENST00000490796 TUT1Q9H6E5 874 aaKnown RBP22.72■■□□□ 1.23
SREBF1-216ENST00000490796 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 SLC12A7Q9Y666 1083 aa22.72■■□□□ 1.23
SREBF1-216ENST00000490796 SH2B2O14492 632 aaPredicted RBP22.71■■□□□ 1.23
SREBF1-216ENST00000490796 SLC27A2O14975 620 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 NBNO60934 754 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 CXCL10P02778 98 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 LGALS2P05162 132 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 ICAM3P32942 547 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 THPOP40225 353 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 MRPS9P82933 396 aaKnown RBP22.71■■□□□ 1.23
SREBF1-216ENST00000490796 TAP1Q03518 808 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 XRRA1Q6P2D8 792 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 USP17L6PQ6QN14 398 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 METTL7BQ6UX53 244 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 NLRX1Q86UT6 975 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 ASB2Q96Q27 587 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 C16orf70Q9BSU1 422 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 EMSYQ7Z589 1322 aa22.71■■□□□ 1.23
SREBF1-216ENST00000490796 SPATA31C2B4DYI2 1134 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms