RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	NKRF	O15226	690 aa	Known RBP eCLIP	21.25	■□□□□ 0.99
C4A-256	ENST00000490663	CDKL5	O76039	1030 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	GGPS1	O95749	300 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	NLRP5	P59047	1200 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	NKX3-2	P78367	333 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	RABEP1	Q15276	862 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	REXO1	Q8N1G1	1221 aa	Known RBP	21.25	■□□□□ 0.99
C4A-256	ENST00000490663	CCDC148	Q8NFR7	591 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	CCDC12	Q8WUD4	166 aa	Predicted RBP	21.25	■□□□□ 0.99
C4A-256	ENST00000490663	INPP4A	Q96PE3	977 aa	Predicted RBP	21.25	■□□□□ 0.99
C4A-256	ENST00000490663	LIMCH1	Q9UPQ0	1083 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663		Q9Y3F1	56 aa		21.25	■□□□□ 0.99
C4A-256	ENST00000490663	PQBP1	O60828	265 aa	Known RBP	21.24	■□□□□ 0.99
C4A-256	ENST00000490663	MMP3	P08254	477 aa		21.24	■□□□□ 0.99
C4A-256	ENST00000490663	FDPS	P14324	419 aa	Known RBP	21.24	■□□□□ 0.99
C4A-256	ENST00000490663	CHMP4BP1	P59074	171 aa		21.24	■□□□□ 0.99
C4A-256	ENST00000490663	SP4	Q02446	784 aa		21.24	■□□□□ 0.99
C4A-256	ENST00000490663	CYP2W1	Q8TAV3	490 aa		21.24	■□□□□ 0.99
C4A-256	ENST00000490663	GLT1D1	Q96MS3	346 aa		21.24	■□□□□ 0.99
C4A-256	ENST00000490663	ITGB5	P18084	799 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	CPT1A	P50416	773 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	AP3B2	Q13367	1082 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	SNX17	Q15036	470 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	NPY5R	Q15761	445 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	DHX37	Q8IY37	1157 aa	Known RBP	21.23	■□□□□ 0.99
C4A-256	ENST00000490663	EHMT1	Q9H9B1	1298 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	UBIAD1	Q9Y5Z9	338 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	GBF1	Q92538	1859 aa		21.23	■□□□□ 0.99
C4A-256	ENST00000490663	SI	P14410	1827 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	ZNF286B	P0CG31	522 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	SREBF1	P36956	1147 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	PURA	Q00577	322 aa	Known RBP	21.22	■□□□□ 0.99
C4A-256	ENST00000490663	TLE2	Q04725	743 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	GNPTAB	Q3T906	1256 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	ALG1	Q9BT22	464 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	PRDM5	Q9NQX1	630 aa	Predicted RBP	21.22	■□□□□ 0.99
C4A-256	ENST00000490663	SH3GLB2	Q9NR46	395 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663	GRIN2D	O15399	1336 aa		21.22	■□□□□ 0.99
C4A-256	ENST00000490663		A6NJR5	290 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	SPATA31C2	B4DYI2	1134 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	FIBP	O43427	364 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	ZEB2	O60315	1214 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	ATP9A	O75110	1047 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	FOS	P01100	380 aa	Predicted RBP	21.21	■□□□□ 0.99
C4A-256	ENST00000490663	GNA11	P29992	359 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	ICAM3	P32942	547 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	ARHGAP4	P98171	946 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	HSDL1	Q3SXM5	330 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	CELF3	Q5SZQ8	465 aa	Known RBP	21.21	■□□□□ 0.99
C4A-256	ENST00000490663	MYSM1	Q5VVJ2	828 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	CYFIP1	Q7L576	1253 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	SH3RF1	Q7Z6J0	888 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	GLT8D2	Q9H1C3	349 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	PCDHA4	Q9UN74	947 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	NR2E3	Q9Y5X4	410 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663	TRIOBP	Q9H2D6	2365 aa		21.21	■□□□□ 0.99
C4A-256	ENST00000490663		A0A0U1RQG5	324 aa	Predicted RBP	21.2	■□□□□ 0.98
C4A-256	ENST00000490663	STAM2	O75886	525 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	AR	P10275	920 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	PRPF38B	Q5VTL8	546 aa	Known RBP	21.2	■□□□□ 0.98
C4A-256	ENST00000490663	XRRA1	Q6P2D8	792 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	NLRX1	Q86UT6	975 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	BLID	Q8IZY5	108 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	OXER1	Q8TDS5	423 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	SPATA33	Q96N06	139 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	MXRA8	Q9BRK3	442 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	MLXIP	Q9HAP2	919 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	POLR3E	Q9NVU0	708 aa		21.2	■□□□□ 0.98
C4A-256	ENST00000490663	MYH15	Q9Y2K3	1946 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	TET1	Q8NFU7	2136 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	ZNF76	P36508	570 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	MTMR1	Q13613	665 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	ITGA7	Q13683	1181 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	KCNV1	Q6PIU1	500 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	BICD2	Q8TD16	824 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	GPRASP2	Q96D09	838 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	MTG1	Q9BT17	334 aa	Predicted RBP	21.19	■□□□□ 0.98
C4A-256	ENST00000490663	PHF20	Q9BVI0	1012 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	JADE2	Q9NQC1	790 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	PDLIM7	Q9NR12	457 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	ELP1	O95163	1332 aa		21.19	■□□□□ 0.98
C4A-256	ENST00000490663	ARID2	Q68CP9	1835 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	FAM205C	A6NFA0	338 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	FAM86B1	E9PN63	330 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	ARVCF	O00192	962 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	EDIL3	O43854	480 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	ST18	O60284	1047 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	FAM86B2	P0C5J1	330 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	KCNA2	P16389	499 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	GUCY1B3	Q02153	619 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	LAMC2	Q13753	1193 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	BRDT	Q58F21	947 aa	Predicted RBP	21.18	■□□□□ 0.98
C4A-256	ENST00000490663	CRYGN	Q8WXF5	182 aa		21.18	■□□□□ 0.98
C4A-256	ENST00000490663	ZSCAN31	Q96LW9	406 aa	Predicted RBP	21.18	■□□□□ 0.98
C4A-256	ENST00000490663	RBAK-RBAKDN	I3L0D1	243 aa		21.17	■□□□□ 0.98
C4A-256	ENST00000490663	TGFB3	P10600	412 aa		21.17	■□□□□ 0.98
C4A-256	ENST00000490663	FAM47C	Q5HY64	1035 aa		21.17	■□□□□ 0.98
C4A-256	ENST00000490663	DAGLB	Q8NCG7	672 aa		21.17	■□□□□ 0.98
C4A-256	ENST00000490663	PPTC7	Q8NI37	304 aa		21.17	■□□□□ 0.98
C4A-256	ENST00000490663	KAT2B	Q92831	832 aa		21.17	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms