RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ACLYP53396 1101 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 SEC23AQ15436 765 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 SLC35G1Q2M3R5 365 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 TKFCQ3LXA3 575 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 SLC30A10Q6XR72 485 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 STOX1Q6ZVD7 989 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 CHST3Q7LGC8 479 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 DGKHQ86XP1 1220 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 FBXO16Q8IX29 292 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 MSL3Q8N5Y2 521 aaKnown RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 ENAHQ8N8S7 591 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 MAFAQ8NHW3 353 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 PPP1R13LQ8WUF5 828 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 ANKS1AQ92625 1134 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 ESR2Q92731 530 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 ABHD16BQ9H3Z7 469 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 XIRP2A4UGR9 3374 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 HIP1O00291 1037 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 DYNC1LI2O43237 492 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 ASGR1P07306 291 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 CYP21A2P08686 494 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 C6orf222P0C671 652 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 CALML3P27482 149 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 GJA9P57773 515 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 TNFAIP2Q03169 654 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 IMMTQ16891 758 aaKnown RBP8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 RNF180Q86T96 592 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 ZSCAN1Q8NBB4 408 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 COPS5Q92905 334 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 RNF41Q9H4P4 317 aaPredicted RBP8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 EVA1BQ9NVM1 165 aa8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 GNEQ9Y223 722 aaKnown RBP8.57□□□□□ -1.04
PRPF4B-208ENST00000490653 GRIN2DO15399 1336 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 TNKSO95271 1327 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 CHD7Q9P2D1 2997 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 PTPDC1A2A3K4 754 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 ASB14A6NK59 587 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 SGSM2O43147 1006 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 PQBP1O60828 265 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 PCP11498 1178 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 CDK7P50613 346 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 ALDH5A1P51649 535 aaPredicted RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 RPS6P62753 249 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 FAAP100Q0VG06 881 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 USH1GQ495M9 461 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 GNASQ5JWF2 1037 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 KIAA1211Q6ZU35 1233 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 NOL8Q76FK4 1167 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 C16orf59Q7L2K0 433 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 MORC4Q8TE76 937 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 VTI1AQ96AJ9 217 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 ZFP42Q96MM3 310 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 TAAR1Q96RJ0 339 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 UPF3AQ9H1J1 476 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 KAT14Q9H8E8 782 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 JMJD4Q9H9V9 463 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 STARD7Q9NQZ5 370 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 COL20A1Q9P218 1284 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 CTNNA3Q9UI47 895 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 REV3LO60673 3130 aa8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 BAZ2BQ9UIF8 2168 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-208ENST00000490653 E7EWF7 191 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 PPP1R11O60927 126 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 ANTXR2P58335 489 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 PSMC6P62333 389 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 SMAD3P84022 425 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 KCNH2Q12809 1159 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 CDC37Q16543 378 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 QRICH1Q2TAL8 776 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 C1orf53Q5VUE5 145 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 CXCL17Q6UXB2 119 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 RNF207Q6ZRF8 634 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 IQCA1Q86XH1 822 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 BAP1Q92560 729 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 MAP4K1Q92918 833 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 KRT23Q9C075 422 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 MAD2L2Q9UI95 211 aa8.55□□□□□ -1.04
PRPF4B-208ENST00000490653 LAMA4Q16363 1823 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 ARVCFO00192 962 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 KIAA0355O15063 1070 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 ARIH2O95376 493 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 CLTBP09497 229 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 CST5P28325 142 aaPredicted RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 NKX3-2P78367 333 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 ADGRE1Q14246 886 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 GPATCH4Q5T3I0 446 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 IFIT1BQ5T764 474 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 IQSEC1Q6DN90 963 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms