RNA–Protein interactions for RNA: ENST00000489941.6

LMO7-212, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-212ENST00000489941 SNX21Q969T3 373 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 CCDC17Q96LX7 622 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 PNMA5Q96PV4 448 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 COL25A1Q9BXS0 654 aaPredicted RBP6.54□□□□□ -1.36
LMO7-212ENST00000489941 AS3MTQ9HBK9 375 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 ZSWIM5Q9P217 1185 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 BRPF3Q9ULD4 1205 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 TPCN1Q9ULQ1 816 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 LIMCH1Q9UPQ0 1083 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 NID2Q14112 1375 aa6.54□□□□□ -1.36
LMO7-212ENST00000489941 FRMPD2Q68DX3 1309 aaPredicted RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 TRIM75PA6NK02 468 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 CELF2O95319 508 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 CALM1P0DP23 149 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 CALM2P0DP24 149 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 CALM3P0DP25 149 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 TOP1P11387 765 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 INPP5BP32019 993 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 KIF5BP33176 963 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 LAMC2Q13753 1193 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 VGLL4Q14135 290 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 ME3Q16798 604 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 ARMC9Q7Z3E5 817 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 FOXP4Q8IVH2 680 aaPredicted RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 GPR161Q8N6U8 529 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 FAM184AQ8NB25 1140 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 EDEM1Q92611 657 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 ZSCAN31Q96LW9 406 aaPredicted RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 IPO9Q96P70 1041 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 TMEM47Q9BQJ4 181 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 ELP3Q9H9T3 547 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 NCOA5Q9HCD5 579 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 RBM28Q9NW13 759 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 SMC3Q9UQE7 1217 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 FNDC3AQ9Y2H6 1198 aaKnown RBP6.53□□□□□ -1.36
LMO7-212ENST00000489941 KIF3AQ9Y496 699 aa6.53□□□□□ -1.36
LMO7-212ENST00000489941 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 OPLAHO14841 1288 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 NDUFB5O43674 189 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 FGRP09769 529 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 PARP1P09874 1014 aaKnown RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 EEF2P13639 858 aaKnown RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 CAP2P40123 477 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 LIFRP42702 1097 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 CTBSQ01459 385 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 EXOSC10Q01780 885 aaKnown RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 AKAP17AQ02040 695 aaKnown RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 SCRN1Q12765 414 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 SEC23AQ15436 765 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 FAM26DQ5JW98 314 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 TATDN1Q6P1N9 297 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 SGMS1Q86VZ5 419 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 HOMER1Q86YM7 354 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 SPICE1Q8N0Z3 855 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 SMC1BQ8NDV3 1235 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.52□□□□□ -1.37
LMO7-212ENST00000489941 PIBF1Q8WXW3 757 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 ZKSCAN4Q969J2 545 aaPredicted RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 DDX11Q96FC9 970 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 CNTNAP3BQ96NU0 1288 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 MTA3Q9BTC8 594 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 SLC26A6Q9BXS9 759 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 TANGO6Q9C0B7 1094 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 KANSL2Q9H9L4 492 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 GBA2Q9HCG7 927 aaPredicted RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 MTMR4Q9NYA4 1195 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 CLIP2Q9UDT6 1046 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 SEC63Q9UGP8 760 aaKnown RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 DMGDHQ9UI17 866 aaKnown RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.52□□□□□ -1.37
LMO7-212ENST00000489941 LOC285556D6RIA3 1793 aa6.52□□□□□ -1.37
LMO7-212ENST00000489941 CNTNAP5Q8WYK1 1306 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 IGKV6D-41A0A0C4DH26 115 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 CCDC196A0A1B0GTZ2 297 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 JAK2O60674 1132 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 CTNND1O60716 968 aaKnown RBP6.51□□□□□ -1.37
LMO7-212ENST00000489941 PFKFB2O60825 505 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 DTNBO60941 627 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 XYLBO75191 536 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 PLEKHA8P1O95397 391 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 NDUFB10O96000 172 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 GOLGA8HP0CJ92 632 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 PDIA3P30101 505 aaKnown RBP6.51□□□□□ -1.37
LMO7-212ENST00000489941 ECE1P42892 770 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 SLC1A4P43007 532 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 RCAN1P53805 252 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 HMGN5P82970 282 aaKnown RBP6.51□□□□□ -1.37
LMO7-212ENST00000489941 ST3GAL1Q11201 340 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 GRM1Q13255 1194 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 GNL2Q13823 731 aaKnown RBP6.51□□□□□ -1.37
LMO7-212ENST00000489941 TRIM29Q14134 588 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 UBAP2LQ14157 1087 aaKnown RBP6.51□□□□□ -1.37
LMO7-212ENST00000489941 RRP1BQ14684 758 aaKnown RBP6.51□□□□□ -1.37
LMO7-212ENST00000489941 GRM4Q14833 912 aa6.51□□□□□ -1.37
LMO7-212ENST00000489941 ASPRV1Q53RT3 343 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms