RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 GGPS1O95749 300 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 FOSP01100 380 aaPredicted RBP15.33■□□□□ 0.04
CCL28-202ENST00000489442 FAAP100Q0VG06 881 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 NTRK3Q16288 839 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 DGKDQ16760 1214 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 INPP4AQ96PE3 977 aaPredicted RBP15.33■□□□□ 0.04
CCL28-202ENST00000489442 SLKQ9H2G2 1235 aaPredicted RBP15.33■□□□□ 0.04
CCL28-202ENST00000489442 C6orf50Q9HD87 102 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
CCL28-202ENST00000489442 PCDH10Q9P2E7 1040 aa15.33■□□□□ 0.04
CCL28-202ENST00000489442 DOCK5Q9H7D0 1870 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 TRIM43BA6NCK2 446 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 FIBPO43427 364 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 MMP3P08254 477 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 UBA1P22314 1058 aaKnown RBP15.32■□□□□ 0.04
CCL28-202ENST00000489442 GNA11P29992 359 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 BMP8BP34820 402 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 NEK4P51957 841 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 NEDD9Q14511 834 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 FAM47CQ5HY64 1035 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
CCL28-202ENST00000489442 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 PPTC7Q8NI37 304 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
CCL28-202ENST00000489442 TRIM43Q96BQ3 446 aaPredicted RBP15.32■□□□□ 0.04
CCL28-202ENST00000489442 SPATA33Q96N06 139 aa15.32■□□□□ 0.04
CCL28-202ENST00000489442 ALDH8A1Q9H2A2 487 aaPredicted RBP15.32■□□□□ 0.04
CCL28-202ENST00000489442 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 SPATA31C2B4DYI2 1134 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CCL28-202ENST00000489442 KIAA0355O15063 1070 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 CDKL5O76039 1030 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 ICAM3P32942 547 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 AK2P54819 239 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 SP2Q02086 613 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 PKN1Q16512 942 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 NBPF20Q3BBV1 942 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 FAM126BQ8IXS8 530 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 SLC43A3Q8NBI5 491 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 BADQ92934 168 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 CDHR1Q96JP9 859 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 GRIN2DO15399 1336 aa15.31■□□□□ 0.04
CCL28-202ENST00000489442 LTBP2Q14767 1821 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 A0A1W2PPC1 479 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 PPFIA4O75335 1185 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 ZNF76P36508 570 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 AP3B2Q13367 1082 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 C8orf34Q49A92 452 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 JAKMIP3Q5VZ66 844 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 MCTP2Q6DN12 878 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 CYFIP1Q7L576 1253 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 REXO1Q8N1G1 1221 aaKnown RBP15.3■□□□□ 0.04
CCL28-202ENST00000489442 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
CCL28-202ENST00000489442 BICD2Q8TD16 824 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 GPRASP2Q96D09 838 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 PGBD1Q96JS3 809 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 PRO3102Q9H379 93 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 TMEM260Q9NX78 707 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 TPCN1Q9ULQ1 816 aa15.3■□□□□ 0.04
CCL28-202ENST00000489442 ESYT2A0FGR8 921 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 DEXIO95424 95 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 TIMP1P01033 207 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 SUPT20HL2P0C7V6 817 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 NLRP5P59047 1200 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 MTMR1Q13613 665 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 HSDL1Q3SXM5 330 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 NFRKBQ6P4R8 1299 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 IL17RAQ96F46 866 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 KATNAL1Q9BW62 490 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 TRPV6Q9H1D0 765 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 VPS54Q9P1Q0 977 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 KAT6AQ92794 2004 aa15.29■□□□□ 0.04
CCL28-202ENST00000489442 MAFGO15525 162 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 B4GALT4O60513 344 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 PFKFB2O60825 505 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 CD4P01730 458 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 ZNF286BP0CG31 522 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 ITGB5P18084 799 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
CCL28-202ENST00000489442 SP4Q02446 784 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 SCRN1Q12765 414 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 SEMA3FQ13275 785 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 METTL7BQ6UX53 244 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 TDHQ8IZJ6 230 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 C7orf31Q8N865 590 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 PPP1R13LQ8WUF5 828 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 SENP7Q9BQF6 1050 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 ALG1Q9BT22 464 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 PPP1R12CQ9BZL4 782 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 UPF2Q9HAU5 1272 aaKnown RBP15.28■□□□□ 0.04
CCL28-202ENST00000489442 SH3GLB2Q9NR46 395 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 TBX21Q9UL17 535 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
CCL28-202ENST00000489442 ITGB8P26012 769 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms