RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 FBXL16Q8N461 479 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 USP38Q8NB14 1042 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 VWCEQ96DN2 955 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 EHMT1Q9H9B1 1298 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 CXXC1Q9P0U4 656 aaPredicted RBP15.52■□□□□ 0.08
LMO4-203ENST00000489303 V9GY48 417 aaPredicted RBP15.52■□□□□ 0.08
LMO4-203ENST00000489303 CNTNAP5Q8WYK1 1306 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 BAZ2BQ9UIF8 2168 aaKnown RBP15.51■□□□□ 0.07
LMO4-203ENST00000489303 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
LMO4-203ENST00000489303 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
LMO4-203ENST00000489303 SPDYE3A6NKU9 549 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 B4GALT4O60513 344 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 NAPAP54920 295 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 CCL23P55773 120 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 AKAP17AQ02040 695 aaKnown RBP15.51■□□□□ 0.07
LMO4-203ENST00000489303 DGKDQ16760 1214 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 RASIP1Q5U651 963 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 PPP1R18Q6NYC8 613 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 TEX2Q8IWB9 1127 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 AFG1LQ8WV93 481 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 GPKOWQ92917 476 aaPredicted RBP eCLIP15.51■□□□□ 0.07
LMO4-203ENST00000489303 PBX4Q9BYU1 374 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 GLT8D2Q9H1C3 349 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 ZSWIM6Q9HCJ5 1215 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
LMO4-203ENST00000489303 MEIS2O14770 477 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 MMP3P08254 477 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 FOSL2P15408 326 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 ADD1P35611 737 aaKnown RBP15.5■□□□□ 0.07
LMO4-203ENST00000489303 ARHGAP1Q07960 439 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 NLRX1Q86UT6 975 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 IL31RAQ8NI17 732 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 EMID1Q96A84 441 aaPredicted RBP15.5■□□□□ 0.07
LMO4-203ENST00000489303 WNT8AQ9H1J5 351 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 ZNF576Q9H609 170 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 MLXIPQ9HAP2 919 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 SPTBN5Q9NRC6 3674 aaKnown RBP15.5■□□□□ 0.07
LMO4-203ENST00000489303 CUL9Q8IWT3 2517 aa15.5■□□□□ 0.07
LMO4-203ENST00000489303 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 CDC27P30260 824 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 ADCY7P51828 1080 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 CHMP4BP1P59074 171 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 FUT2Q10981 343 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 PPIGQ13427 754 aaKnown RBP eCLIP15.49■□□□□ 0.07
LMO4-203ENST00000489303 NEDD9Q14511 834 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 PCNX4Q63HM2 1172 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 WWC2Q6AWC2 1192 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 TMEM199Q8N511 208 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 TIFAQ96CG3 184 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 SCLYQ96I15 445 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 SPATA33Q96N06 139 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 AGXT2Q9BYV1 514 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 ALDH8A1Q9H2A2 487 aaPredicted RBP15.49■□□□□ 0.07
LMO4-203ENST00000489303 HIPK3Q9H422 1215 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 PRDM6Q9NQX0 595 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 FAM217BQ9NTX9 383 aaPredicted RBP15.49■□□□□ 0.07
LMO4-203ENST00000489303 TRMT13Q9NUP7 481 aaKnown RBP15.49■□□□□ 0.07
LMO4-203ENST00000489303 RTEL1Q9NZ71 1219 aa15.49■□□□□ 0.07
LMO4-203ENST00000489303 GBF1Q92538 1859 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 FIBPO43427 364 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 RGS20O76081 388 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 GGPS1O95749 300 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 CYP2C9P11712 490 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 PTPN11Q06124 597 aaPredicted RBP15.48■□□□□ 0.07
LMO4-203ENST00000489303 UBE2SQ16763 222 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 NBPF20Q3BBV1 942 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 CELF3Q5SZQ8 465 aaKnown RBP15.48■□□□□ 0.07
LMO4-203ENST00000489303 NFRKBQ6P4R8 1299 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 OTOP2Q7RTS6 562 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 CCDC12Q8WUD4 166 aaPredicted RBP15.48■□□□□ 0.07
LMO4-203ENST00000489303 ZFP91Q96JP5 570 aaPredicted RBP15.48■□□□□ 0.07
LMO4-203ENST00000489303 CDHR1Q96JP9 859 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 INPP4AQ96PE3 977 aaPredicted RBP15.48■□□□□ 0.07
LMO4-203ENST00000489303 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
LMO4-203ENST00000489303 KATNAL1Q9BW62 490 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 IL23AQ9NPF7 189 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 RIC8AQ9NPQ8 531 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 PDRG1Q9NUG6 133 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 NOD1Q9Y239 953 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 CHD9Q3L8U1 2897 aa15.48■□□□□ 0.07
LMO4-203ENST00000489303 SMCO2A6NFE2 343 aa15.47■□□□□ 0.07
LMO4-203ENST00000489303 STXBP3O00186 592 aa15.47■□□□□ 0.07
LMO4-203ENST00000489303 PPFIA4O75335 1185 aa15.47■□□□□ 0.07
LMO4-203ENST00000489303 FOSP01100 380 aaPredicted RBP15.47■□□□□ 0.07
LMO4-203ENST00000489303 SCG2P13521 617 aa15.47■□□□□ 0.07
LMO4-203ENST00000489303 UBA1P22314 1058 aaKnown RBP15.47■□□□□ 0.07
LMO4-203ENST00000489303 ICAM3P32942 547 aa15.47■□□□□ 0.07
LMO4-203ENST00000489303 MRPS9P82933 396 aaKnown RBP15.47■□□□□ 0.07
LMO4-203ENST00000489303 PFKFB3Q16875 520 aaPredicted RBP15.47■□□□□ 0.07
LMO4-203ENST00000489303 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
LMO4-203ENST00000489303 GIMAP8Q8ND71 665 aaPredicted RBP15.47■□□□□ 0.07
LMO4-203ENST00000489303 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
LMO4-203ENST00000489303 YBX2Q9Y2T7 364 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms