RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
USP11-211ENST00000489111 WDR11Q9BZH6 1224 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 MAGEF1Q9HAY2 307 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 ADD3Q9UEY8 706 aaKnown RBP11.27□□□□□ -0.61
USP11-211ENST00000489111 UBIAD1Q9Y5Z9 338 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
USP11-211ENST00000489111 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
USP11-211ENST00000489111 STAM2O75886 525 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 NR3C2P08235 984 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 FCER1AP12319 257 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 ITGB5P18084 799 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 FSTL1Q12841 308 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 PNOCQ13519 176 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 E2F4Q16254 413 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 GNPTABQ3T906 1256 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
USP11-211ENST00000489111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP11-211ENST00000489111 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 GRAMD1CQ8IYS0 662 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 SLC5A5Q92911 643 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 SMARCE1Q969G3 411 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
USP11-211ENST00000489111 PURBQ96QR8 312 aaKnown RBP11.26□□□□□ -0.61
USP11-211ENST00000489111 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 PLIN2Q99541 437 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 RIT2Q99578 217 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 TEKT3Q9BXF9 490 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 NT5C3AQ9H0P0 336 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 ZCCHC17Q9NP64 241 aaKnown RBP11.26□□□□□ -0.61
USP11-211ENST00000489111 JADE2Q9NQC1 790 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 ANO10Q9NW15 660 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 VAV3Q9UKW4 847 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
USP11-211ENST00000489111 TCHHQ07283 1943 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 CHMP2AO43633 222 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 ARP10275 920 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 AFMP43652 599 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 INHBEP58166 350 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
USP11-211ENST00000489111 CNTN2Q02246 1040 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 PDE4DQ08499 809 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 TAF1CQ15572 869 aaPredicted RBP11.25□□□□□ -0.61
USP11-211ENST00000489111 PDXDC2PQ6P474 469 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 VSIG10LQ86VR7 867 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 ERCC4Q92889 916 aaPredicted RBP11.25□□□□□ -0.61
USP11-211ENST00000489111 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 PAGE5Q96GU1 130 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 HHIPL1Q96JK4 782 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 CDHR1Q96JP9 859 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 PTPN18Q99952 460 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 FUCA2Q9BTY2 467 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 MMTAG2Q9BU76 263 aaKnown RBP11.25□□□□□ -0.61
USP11-211ENST00000489111 KCNH7Q9NS40 1196 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 PKD2L1Q9P0L9 805 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 PTPRFP10586 1907 aa11.25□□□□□ -0.61
USP11-211ENST00000489111 BIN1O00499 593 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 FOXN1O15353 648 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
USP11-211ENST00000489111 PSMD10O75832 226 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 CAVIN2O95810 425 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 MRE11P49959 708 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 ALDH5A1P51649 535 aaPredicted RBP11.24□□□□□ -0.61
USP11-211ENST00000489111 AMPD3Q01432 767 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 SPIRE1Q08AE8 756 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 GRM1Q13255 1194 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 GRB10Q13322 594 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 PPP2R5CQ13362 524 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 STXBP2Q15833 593 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 FAM110CQ1W6H9 321 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 Q3C1V9 767 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 ANO6Q4KMQ2 910 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 TMEM119Q4V9L6 283 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 INPP4AQ96PE3 977 aaPredicted RBP11.24□□□□□ -0.61
USP11-211ENST00000489111 NAT10Q9H0A0 1025 aaKnown RBP11.24□□□□□ -0.61
USP11-211ENST00000489111 PORCNQ9H237 461 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 GRPEL1Q9HAV7 217 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
USP11-211ENST00000489111 TBC1D22BQ9NU19 505 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 RLFQ13129 1914 aa11.24□□□□□ -0.61
USP11-211ENST00000489111 RBBP6Q7Z6E9 1792 aaKnown RBP11.23□□□□□ -0.61
USP11-211ENST00000489111 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 DDX39AO00148 427 aaKnown RBP11.23□□□□□ -0.61
USP11-211ENST00000489111 IGF2BP3O00425 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
USP11-211ENST00000489111 MAFGO15525 162 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 MYL1P05976 194 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 PGK2P07205 417 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 YY1P25490 414 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 MAPK4P31152 587 aa11.23□□□□□ -0.61
USP11-211ENST00000489111 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
USP11-211ENST00000489111 NAALADL2Q58DX5 795 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms