RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CACNA2D4Q7Z3S7 1137 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 NUCKS1Q9H1E3 243 aaKnown RBP21.53■■□□□ 1.04
HMG20B-213ENST00000488973 A0A0G2JS52 829 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 TSPY3P0CV98 308 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 TSPY8P0CW00 308 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 INPP5BP32019 993 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 CFAP58Q5T655 872 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 KDM7AQ6ZMT4 941 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 CD302Q8IX05 232 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 TACO1Q9BSH4 297 aaKnown RBP21.53■■□□□ 1.04
HMG20B-213ENST00000488973 BLOC1S4Q9NUP1 217 aa21.53■■□□□ 1.04
HMG20B-213ENST00000488973 NAV1Q8NEY1 1877 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 ATAD5Q96QE3 1844 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 MYMKA6NI61 221 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 NDUFAB1O14561 156 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 KCNQ2O43526 872 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 GRB10Q13322 594 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 CLEC4GQ6UXB4 293 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 LRRC55Q6ZSA7 311 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 ANKRD13CQ8N6S4 541 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 SYN2Q92777 582 aaPredicted RBP21.52■■□□□ 1.04
HMG20B-213ENST00000488973 KAT2BQ92831 832 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.04
HMG20B-213ENST00000488973 DYNLL2Q96FJ2 89 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 TMEM47Q9BQJ4 181 aa21.52■■□□□ 1.04
HMG20B-213ENST00000488973 GRID2IPA4D2P6 1211 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 SMCO2A6NFE2 343 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 GLI1P08151 1106 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 SLC1A4P43007 532 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 TTC19Q6DKK2 380 aaPredicted RBP21.51■■□□□ 1.03
HMG20B-213ENST00000488973 C1orf131Q8NDD1 294 aaKnown RBP21.51■■□□□ 1.03
HMG20B-213ENST00000488973 LUC7LQ9NQ29 371 aaKnown RBP21.51■■□□□ 1.03
HMG20B-213ENST00000488973 BUB1O43683 1085 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 PDCLQ13371 301 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 SLC4A8Q2Y0W8 1093 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 LARP4BQ92615 738 aaKnown RBP21.51■■□□□ 1.03
HMG20B-213ENST00000488973 MS4A14Q96JA4 679 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 PLCD4Q9BRC7 762 aa21.51■■□□□ 1.03
HMG20B-213ENST00000488973 HEXIM1O94992 359 aaKnown RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 CARSP49589 748 aaKnown RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 PSMD2Q13200 908 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 SLC9C1Q4G0N8 1177 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 SPTY2D1Q68D10 685 aaPredicted RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 ZNF444Q8N0Y2 327 aaPredicted RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 CCDC43Q96MW1 224 aaKnown RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 RABEP2Q9H5N1 569 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 RIC8AQ9NPQ8 531 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 NFU1Q9UMS0 254 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 ZNF831Q5JPB2 1677 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 KRT14P02533 472 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 NAP1L1P55209 391 aaKnown RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 DZIP1Q86YF9 867 aaKnown RBP21.5■■□□□ 1.03
HMG20B-213ENST00000488973 PROM2Q8N271 834 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 PNMA5Q96PV4 448 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 TSG101Q99816 390 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 PAGR1Q9BTK6 254 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 EPB41L5Q9HCM4 733 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 CEP72Q9P209 647 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 USP21Q9UK80 565 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 SH3BP1Q9Y3L3 701 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 SAMM50Q9Y512 469 aa21.5■■□□□ 1.03
HMG20B-213ENST00000488973 ZNF233A6NK53 670 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 SERPING1P05155 500 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 FXR2P51116 673 aaKnown RBP eCLIP21.49■■□□□ 1.03
HMG20B-213ENST00000488973 KCNMA1Q12791 1236 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 TBCKQ8TEA7 893 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 MTMR9Q96QG7 549 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 TFCP2L1Q9NZI6 479 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 STX8Q9UNK0 236 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 MYH4Q9Y623 1939 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 NAB2Q15742 525 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 TDRD12Q587J7 1177 aaKnown RBP21.49■■□□□ 1.03
HMG20B-213ENST00000488973 WHAMMQ8TF30 809 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 LRRC27Q9C0I9 530 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 ANKRD2Q9GZV1 360 aa21.49■■□□□ 1.03
HMG20B-213ENST00000488973 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 USP8P40818 1118 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 TXKP42681 527 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 GUCY2DQ02846 1103 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 EHHADHQ08426 723 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 C11orf91Q3C1V1 193 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 SOGA3Q5TF21 947 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 KCTD16Q68DU8 428 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 SH2D3CQ8N5H7 860 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 EPN3Q9H201 632 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 MTMR7Q9Y216 660 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 FAM153BP0C7A2 387 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 SMARCA1P28370 1054 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 LSP1P33241 339 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 ATP2B2Q01814 1243 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 FAM153CQ494X1 144 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 SFMBT2Q5VUG0 894 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 DYMQ7RTS9 669 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 PIK3R5Q8WYR1 880 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 CDK5RAP3Q96JB5 506 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 FAM153AQ9UHL3 310 aa21.48■■□□□ 1.03
HMG20B-213ENST00000488973 PALMO75781 387 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 ATP1A2P50993 1020 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms